feat: add bbknn - #4306
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Intron7 wants to merge 3 commits into
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Codecov / codecov/project
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Aug 20, 2026 in 1s
80.14% (target 75.00%)
View this Pull Request on Codecov
80.14% (target 75.00%)
Details
Codecov Report
❌ Patch coverage is 94.11765% with 9 lines in your changes missing coverage. Please review.
✅ Project coverage is 80.14%. Comparing base (6b5405d) to head (5fa4dd2).
✅ All tests successful. No failed tests found.
| Files with missing lines | Patch % | Lines |
|---|---|---|
| src/scanpy/neighbors/_common.py | 79.48% | 8 Missing |
| src/scanpy/neighbors/_bbknn.py | 98.85% | 1 Missing |
Additional details and impacted files
@@ Coverage Diff @@
## main #4306 +/- ##
==========================================
+ Coverage 80.01% 80.14% +0.13%
==========================================
Files 132 133 +1
Lines 13397 13511 +114
==========================================
+ Hits 10719 10828 +109
- Misses 2678 2683 +5 | Files with missing lines | Coverage Δ | |
|---|---|---|
| src/scanpy/_utils/__init__.py | 75.79% <ø> (ø) |
|
| src/scanpy/external/pp/_bbknn.py | 45.45% <ø> (ø) |
|
| src/scanpy/neighbors/__init__.py | 81.49% <100.00%> (-0.84%) |
⬇️ |
| src/scanpy/neighbors/_types.py | 100.00% <100.00%> (ø) |
|
| src/scanpy/preprocessing/__init__.py | 100.00% <100.00%> (ø) |
|
| src/scanpy/neighbors/_bbknn.py | 98.85% <98.85%> (ø) |
|
| src/scanpy/neighbors/_common.py | 70.83% <79.48%> (+5.92%) |
⬆️ |
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