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Memory savings in the Tesserae algorithm #6

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@winni2k

From #5 (review)

Are there still some useful memory reductions to be obtained by storing only certain columns of the traceback and computing forward when necessary? Ultimately my goal will be to treat ultra-long Nanopore reads (~0.1 Mb, maximum ~3 Mbp) with Tesserae. But I'm not sure what the engineering requirements are to get there yet.

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  1. winni2k commented on Apr 18, 2019

    @winni2k
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    @kvg: Do you have an example data set that we could use for testing?

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