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Switch rust-htslib to noodles - #118

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ewels wants to merge 4 commits into

mainfrom

noodles-migration-redo

Draft

Switch rust-htslib to noodles#118
ewels wants to merge 4 commits into
mainfrom
noodles-migration-redo

Commits on Jun 17, 2026
- Migrate BAM I/O from rust-htslib to noodles (#115)
  
  ewels
  and
  cursoragent
  committed
  4a10b63
- fix(bam): harden noodles compatibility shim from PR #115 review
  
  ewels
  and
  claude
  committed
  4d4db24
- perf(bam): stream indexed reads instead of buffering whole references
  
  ewels
  and
  claude
  committed
  94193d2
- perf(bam): stream CRAM reads via self-referential cursors
  
  ewels
  and
  claude
  committed
  0b00cf1