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biom-format: Add version 2.1.18 - #2738
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Nightly version bump omitted the patches/biom-format/<version> directory for 2.1.18, so the build's unconditional `git apply .../*.patch` step failed with "No such file or directory" before any build/test ran. Copied forward the same patch set from 2.1.17 (unchanged since then).
Upstream 2.1.18 already replaced np.in1d with np.isin in Table.from_hdf5's id subsetting (biocore/biom-format#1003, landed in 20ace60, listed in the 2.1.18 ChangeLog), so the carried-forward patch no longer applies and has nothing left to change; no other np.in1d use remains in the 2.1.18 tree. 2.1.17 keeps its patch. With no patches left for 2.1.18, skip the apply step when the version has no patch directory, as build-fastparquet.yml does.
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Automatically generated by the nightly
check_versions.pyrun.biom-format v2.1.17 -> v2.1.18
Every
- version:entry added todocs/packages/biom-format.yamlis built by this PR's ownbuild-biom-format.ymlrun; merging publishes the wheels.