NGS-MSTB - Next Generation Sequencing Microbial Surveillance Toolbox for scalable de-novo assembly of viral genomes and bacterial genes

The main back-end component of NGS-MSTB: Next Generation Sequencing Microbial Surveillance Toolbox

Containerized deployment of NGS-MSTB

Recipes for the custom Conda packages in NGS-MSTB system

Reference data needed by MICGENT package

Example multi-target config for deploying ngs-mstb-docker