add GTRspmix models#22
Conversation
citation will be added
|
Looks good. But I will have to wait until a version of IQ-TREE is released with these models. Right now it's in the GitHub code, but not released yet in the iqtree website |
|
This will be merged once there is a new release of IQ-TREE with these models |
|
Can you also add a section about how to use GTRspmix in this document: https://iqtree.github.io/doc/Estimating-amino-acid-substitution-models. After the section about GTRpmix. |
|
I don't think GTRspmix requires any special instructions in the IQ-TREE manual, as there are no dedicated flags for it. Or should we add broad introduction and simplest command example? |
|
Does your wrapper script offer a single command line to do the estimation? If yes, we can document it in that web page there. But it's up to you. I was just thinking how to best inform users, and thought that this page is a good pointer to the feature. |
Hi Minh,
I have added the explanations for GTRspmix models.
Currently, the citation is commented out because we are working on the manuscript and preparing to submit the ms to bioRxiv. I will update the citation with the preprint info as soon as it is posted. Could you please review the text and structure first?
Ryo