Hello,
I found that polyester does not append ;mate1Start:1;mate2Start:1 to read headers when all fragments within a chunk are shorter than fraglen. The issue appears to originate from nonseqinds = (1:length(tObj))[-s] in generate_fragments.R. I would greatly appreciate it if you could further inspect this part of the code.
Thank you.
Hello,
I found that
polyesterdoes not append;mate1Start:1;mate2Start:1to read headers when all fragments within a chunk are shorter thanfraglen. The issue appears to originate fromnonseqinds = (1:length(tObj))[-s]ingenerate_fragments.R. I would greatly appreciate it if you could further inspect this part of the code.Thank you.