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29 changes: 29 additions & 0 deletions tests/fixtures/realworld/README.md
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# Real-world config fixtures

Production configurations vendored from sibling repositories. In every file each
`local:` value was rewritten to `local: payload.placeholder` (validation never reads
payloads); everything else is byte-identical to the source.

## positive/

| File | Source repo | Original path |
|---|---|---|
| `mokg-v12/AYOGLU1.v12.yaml` | MultiomicsNext | `.tablassert/mokg-v12/AYOGLU1.v12.yaml` |
| `mokg-v12/CORREIA3.v12.yaml` | MultiomicsNext | `.tablassert/mokg-v12/CORREIA3.v12.yaml` |
| `mokg-v12/HOYER1.v12.yaml` | MultiomicsNext | `.tablassert/mokg-v12/HOYER1.v12.yaml` |
| `refconfigs/AYOGLU1.yaml` | MultiomicsNext | `.tablassert/refconfigs/AYOGLU1.yaml` |
| `dakp/approved_treats.yaml` | DAKP | `tables/approved_treats.yaml` |
| `dakp/contraindications.yaml` | DAKP | `tables/contraindications.yaml` |
| `dakp/faers_applied_to_treat.yaml` | DAKP | `tables/faers_applied_to_treat.yaml` |
| `dakp/graph.yaml` | DAKP | `tables/graph.yaml` |
| `tableconfigs/AAMER1.yaml` | TableConfigs | `TABLE/FLAKASSIST/AAMER1.yaml` |
| `tableconfigs/ALAM1.yaml` | TableConfigs | `TABLE/MBKG/ALAM1.yaml` |
| `tableconfigs/SILVARODRGUEZ3.yaml` | TableConfigs | `TABLE/FLAKASSIST/SILVARODRGUEZ3.yaml` |
| `tableconfigs/BRUNDAGE5.yaml` | TableConfigs | `TABLE/FLAKASSIST/BRUNDAGE5.yaml` |

## negative/ (deliberate legacy configs; 12.x must reject them)

| File | Source repo | Original path | Why rejected |
|---|---|---|---|
| `DRUGIBD.yaml` | TableConfigs | `TABLE/QI/DRUGIBD.yaml` | legacy keys `syntax: TC3`, `status: alpha`, `provenance.contributors` |
| `MOKG.yaml` | TableConfigs | `GRAPH/MOKG.yaml` | legacy graph layout: no `rig:`, top-level `description:` |
36 changes: 36 additions & 0 deletions tests/fixtures/realworld/negative/DRUGIBD.yaml
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template:
syntax: TC3
status: alpha
source:
kind: excel
local: payload.placeholder
url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9439210/bin/pone.0273612.s002.xlsx
sheet: Biological Therapy
row_slice:
- 1
- auto
statement:
subject:
method: column
encoding: D
prioritize:
- ChemicalEntity
taxon: 9606
predicate: treats
object:
method: column
encoding: A
prioritize:
- Disease
regex:
- pattern: "^CD$"
replacement: "MONDO:0005011"
- pattern: "^UC$"
replacement: "MONDO:0005101"
provenance:
repo: PMC
publication: PMC9439210
contributors:
- kind: tool
name: tablassist
date: 06 MAY 2026
467 changes: 467 additions & 0 deletions tests/fixtures/realworld/negative/MOKG.yaml

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