add 'pyopia --version' command - #386
Merged
animmosmith merged 4 commits intoJul 28, 2026
Merged
Conversation
animmosmith
marked this pull request as ready for review
July 28, 2026 16:25
animmosmith
previously approved these changes
Jul 28, 2026
animmosmith
previously approved these changes
Jul 28, 2026
animmosmith
added a commit
that referenced
this pull request
Jul 28, 2026
Adds coverage for docs, --version, init-project, process, process-realtime, merge-mfdata, convert-raw-images, make-montage, and export-to-ecotaxa, alongside the existing generate-config/modify-config tests. Commands that need real particle stats/ROI images to exercise (process, merge-mfdata, convert-raw-images, make-montage, export-to-ecotaxa) share a single real end-to-end pipeline run against the downloaded SilCam example image via session-scoped fixtures in conftest.py, consistent with the real-download/real-processing approach already used in test_pipeline.py and test_classify.py. The --version test targets the --version option added in PR #386, which has not yet merged into main; it will start passing once that PR lands and this branch is rebased. Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
animmosmith
approved these changes
Jul 28, 2026
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
add 'pyopia --version' command