Remove Monarch from Baseline - #420
Draft
cbizon wants to merge 1 commit into
Draft
Conversation
- Remove MonarchKG from the default Baseline source list - Add graph-spec checks that Baseline keeps direct replacement sources and excludes MonarchKG - Leave MonarchKG source registration and standalone/special graph specs unchanged
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
MonarchKGfrom the defaultBaselinegraph source list.MonarchKGandMonarchKGFullsource registrations intact.MonarchKGunchanged.BaselineexcludesMonarchKGwhile retaining direct replacement sources such asHumanGOAandUbergraphNonredundant.Do Not Merge Yet
Do not merge this PR until #416, #417, #418, and #419 are merged.
Those PRs move the major Monarch-mediated source families into direct ingests or more appropriate existing ingests. This PR should be the final switch that removes Monarch from the default Baseline after those replacements are in place.
Tests
uv run pytest tests/test_graph_spec.py::test_default_baseline_does_not_include_monarchkgLocal Validation Note
uv run pytest tests/test_graph_spec.py::test_default_graph_spec_defines_robomouseis currently blocked in this local venv by an unrelatedpyoxigraphimport mismatch:ImportError: cannot import name 'RdfFormat' from 'pyoxigraph'.