PyProphet v3.0.15

What's Changed

• Refactor SQL queries and add auto-subsampling feature by @singjc in #208
• Add exclude_decoys option and filtering in BaseWriter by @singjc in #209

Full Changelog: v3.0.14...v3.0.15

PyProphet v3.0.14

What's Changed

• fix: matrix exports with 0 data by @singjc in #207

Full Changelog: v3.0.13...v3.0.14

PyProphet v3.0.13

What's Changed

• fix: osw to parquet export with global peptide/protein scores by @singjc in #206

Full Changelog: v3.0.12...v3.0.13

PyProphet v3.0.12

What's Changed

• feat: direct subsampling and applying of OSW during scoring by @singjc in #205

Full Changelog: v3.0.11...v3.0.12

PyProphet v3.0.11

What's Changed

• add version number by @jcharkow in #203

Full Changelog: v3.0.10...v3.0.11

PyProphet v3.0.10

What's Changed

• fix: pin pandas version in docker image by @singjc in #202

Full Changelog: v3.0.9...v3.0.10

PyProphet v3.0.9

What's Changed

• fix: osw export bug and memory view bug by @singjc in #200
• Update cython version to 3.2.4 by @singjc in #201

Full Changelog: v3.0.8...v3.0.9

PyProphet v3.0.8

What's Changed

• Fix pandas IndexError in export matrix summarization (pandas ≥2.1) by @Copilot in #194
• Remove PyInstaller standalone binary packaging infrastructure by @Copilot in #195

Full Changelog: v3.0.7...v3.0.8

PyProphet v3.0.7

What's Changed

• Refactor GitHub Actions for Python publishing by @singjc in #190
• Bump version from 3.0.6 to 3.0.7 by @singjc in #191

Full Changelog: v3.0.6...v3.0.7

PyProphet v3.0.6

What's Changed

• Add/im boundaries to tsv export by @singjc in #175
• chore(deps): bump fonttools from 4.58.1 to 4.60.2 by @dependabot[bot] in #180
• chore(deps): bump urllib3 from 2.5.0 to 2.6.0 by @dependabot[bot] in #176
• Update Python version requirement to <3.14 by @singjc in #188
• Bump version from 3.0.5 to 3.0.6 by @singjc in #189

Full Changelog: v3.0.5...v3.0.6