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Fix broken and outdated links in web and demo workflows (#4071) - #4143

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Labreo:GH-4071-fix-links-web-workflows
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Labreo wants to merge 5 commits into
PecanProject:developfrom
Labreo:GH-4071-fix-links-web-workflows

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@Labreo

@Labreo Labreo commented Oct 2, 2026

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Description

Addresses part of #4071 by updating broken and outdated documentation links across web and demo workflows:

  • book_source/02_demos_tutorials_workflows/03_web_workflow.Rmd:
    • Upgraded Ameriflux and FLUXNET site list URLs to HTTPS and current paths.
    • Updated config.php repository link to the canonical develop branch.
  • book_source/02_demos_tutorials_workflows/04_more_web_interface/02_hidden_analyses.Rmd:
    • Replaced defunct PalEON state data assimilation wiki URL with its Internet Archive snapshot.
  • book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/08_pecan_api.Rmd:
    • Pinned pecanapi package vignette link to release tag v1.7.1 where the vignette remains available.
  • Updated CHANGELOG.md.

Motivation and Context

Addresses part of #4071.

Issue #4071 tracks broken documentation links across the repository. Fixing these links in modular pull requests keeps review cycles small and maintains documentation accuracy.

Review Time Estimate

  • Immediately
  • Within one week
  • When possible

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • My change requires a change to the documentation.
  • My name is in the list of CITATION.cff
  • I agree that PEcAn Project may distribute my contribution under any or all of
    • the same license as the existing code,
    • and/or the BSD 3-clause license.
  • I have updated the CHANGELOG.md.
  • I have updated the documentation accordingly.
  • I have read the CONTRIBUTING document.
  • I have added tests to cover my changes.
  • All new and existing tests passed.

…#4071)

- Upgrade Ameriflux and FLUXNET site list URLs to HTTPS and current path in 03_web_workflow.Rmd.
- Update web config.example.php link to canonical develop branch in 03_web_workflow.Rmd.
- Point PalEON state data assimilation wiki link to Internet Archive in 02_hidden_analyses.Rmd.
- Pin pecanapi vignette link to release tag v1.7.1 in 08_pecan_api.Rmd.
- Update CHANGELOG.md.
Comment thread book_source/02_demos_tutorials_workflows/03_web_workflow.Rmd Outdated
Labreo and others added 4 commits October 6, 2026 07:06
…s/04_docker/08_pecan_api.Rmd

Co-authored-by: Chris Black <chris@ckblack.org>
…s/04_docker/08_pecan_api.Rmd

Co-authored-by: Chris Black <chris@ckblack.org>
Co-authored-by: Chris Black <chris@ckblack.org>
@Labreo

Labreo commented Oct 6, 2026

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Updated according to suggestions and resolved the merge conflicts.

@Labreo
Labreo requested a review from infotroph October 6, 2026 10:09
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2 participants