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ModelSEED

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  1. ModelSEEDDatabase ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    HTML 68 43

  2. ModelSEEDpy ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    Python 27 20

  3. Model-SEED-core Model-SEED-core Public archive

    The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.

    Perl 21 9

  4. ModelSEED-UI ModelSEED-UI Public

    ModelSEED UI (beta)

    HTML 9 8

  5. PlantSEED PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    Perl 6 9

  6. ModelSeedApi ModelSeedApi Public

    Application Programming Interface to the Model Seed

    Perl 4 1

Repositories

Showing 10 of 53 repositories
  • MicrobiomeNotebooks Public
    ModelSEED/MicrobiomeNotebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 19, 2026
  • MSCommunity Public

    A repository of FBA community modeling functions within the ModelSEED ecosystem

    ModelSEED/MSCommunity’s past year of commit activity
    Python 0 0 0 0 Updated Apr 19, 2026
  • editEscher Public

    A library for editing Escher Metabolic Network maps

    ModelSEED/editEscher’s past year of commit activity
    Python 0 0 0 0 Updated Apr 18, 2026
  • modelseed-api Public

    Modern REST API backend for the ModelSEED metabolic modeling platform

    ModelSEED/modelseed-api’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 14, 2026
  • ModelSEEDTemplates Public
    ModelSEED/ModelSEEDTemplates’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Apr 10, 2026
  • ModelSEED-UI Public

    ModelSEED UI (beta)

    ModelSEED/ModelSEED-UI’s past year of commit activity
    HTML 9 MIT 8 28 6 Updated Apr 10, 2026
  • ADP1Notebooks Public
    ModelSEED/ADP1Notebooks’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 16, 2026
  • ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    ModelSEED/ModelSEEDpy’s past year of commit activity
    Python 27 MIT 20 7 3 Updated Feb 11, 2026
  • PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    ModelSEED/PlantSEED’s past year of commit activity
    Perl 6 9 13 0 Updated Feb 2, 2026
  • ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    ModelSEED/ModelSEEDDatabase’s past year of commit activity
    HTML 68 43 22 2 Updated Jan 6, 2026
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