Marzi lab
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CUTnTag-benchmarking-analysis
CUTnTag-benchmarking-analysis PublicForked from neurogenomics/CUTnTag-benchmarking-analysis
Processing, benchmarking and analysis of CUT&Tag against ENCODE ChIP-seq.
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rotenone_rat_ChIP
rotenone_rat_ChIP PublicBulk H3K27ac ChIP-seq and RNA-seq analysis on SN and cortex of rotenone exposed rat
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Repositories
- AstroShape_RNA Public
Marzi-lab/AstroShape_RNA’s past year of commit activity - rotenone_rat_celltype Public Forked from Mingshen-shen/Rat_rotenone_ChIP_CHAS
This is a project deconvolutes the bulk H3K27ac data using CHAS, a deconvolution tool, to determine DARs specific to individual cell types. Furthermore, this approach investigated cell type–specific gene regulatory changes and dysregulated pathways across the SN using GO analysis and partitioned heritability analysis with LDSC.
Marzi-lab/rotenone_rat_celltype’s past year of commit activity - APOE_microglia Public
Marzi-lab/APOE_microglia’s past year of commit activity - CUTnTag-benchmarking-analysis Public Forked from neurogenomics/CUTnTag-benchmarking-analysis
Processing, benchmarking and analysis of CUT&Tag against ENCODE ChIP-seq.
Marzi-lab/CUTnTag-benchmarking-analysis’s past year of commit activity - rotenone_rat_ChIP Public
Bulk H3K27ac ChIP-seq and RNA-seq analysis on SN and cortex of rotenone exposed rat
Marzi-lab/rotenone_rat_ChIP’s past year of commit activity
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