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@HarmonizedMRI

HarmonizedMRI

Vendor-neutral MRI acquisition and reconstruction protocols

Welcome to the HarmonizedMRI project

The HarmonizedMRI project is dedicated to supporting the development and dissemination of open, transparent, and vendor-neutral MRI sequences and protocols based on the Pulseq sequence development platform.

Browse available Pulseq protocols: You can browse sequences developed by us as well as the broader community by checking out the various repositories on this site, and the project list at https://harmonizedmri.github.io/.

Contribute your own Pulseq project: We invite you to submit your own project using the Google form at https://harmonizedmri.github.io/, or join the development team and create a new repository on this site.

Pulseq user group virtual meeting: Please join our monthly Pulseq user group virtual meeting, open to anyone interested in Pulseq registration here.

We want to hear from you! Please take a moment to fill out this form to let us know about your needs and interests.

To read more about our team and mission, see https://harmonizedmri.github.io/about/.

Discussion forums

General: https://github.com/orgs/HarmonizedMRI/discussions

Pulseq: https://github.com/pulseq/pulseq/discussions

Talks and webinars

Pinned Loading

  1. B0shimming B0shimming Public

    MATLAB 12 2

  2. Calibration Calibration Public

    MATLAB 4 3

Repositories

Showing 10 of 26 repositories
  • harmonizedQSM Public

    QSM post-processing harmonization particularly for 7T data.

    HarmonizedMRI/harmonizedQSM's past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated Sep 10, 2026
  • megre_label Public

    multi-echo gradient echo with online ICE reconstruction

    HarmonizedMRI/megre_label's past year of commit activity
    MATLAB 5 MIT 1 0 0 Updated Sep 8, 2026
  • wave-gre-flow-comp Public

    Wave GRE/SWI sequence and reconstruction with flow compensation and FLASH-based PSF calibration module

    HarmonizedMRI/wave-gre-flow-comp's past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 2, 2026
  • wave-mprage Public

    Wave MPRAGE sequence and reconstruction with FLASH-based PSF calibration module

    HarmonizedMRI/wave-mprage's past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 1, 2026
  • Functional Public
    HarmonizedMRI/Functional's past year of commit activity
    MATLAB 8 MIT 0 0 0 Updated Aug 21, 2026
  • B0shimming Public
    HarmonizedMRI/B0shimming's past year of commit activity
    MATLAB 12 MIT 2 0 0 Updated Aug 19, 2026
  • SMS-EPI Public
    HarmonizedMRI/SMS-EPI's past year of commit activity
    MATLAB 11 MIT 3 0 0 Updated Aug 19, 2026
  • utils Public
    HarmonizedMRI/utils's past year of commit activity
    MATLAB 2 MIT 2 1 0 Updated Aug 4, 2026
  • raw2ismrmrd Public

    Write vendor-specific raw data to ISMRMRD file

    HarmonizedMRI/raw2ismrmrd's past year of commit activity
    Python 1 MIT 0 0 1 Updated Aug 1, 2026
  • pge2 Public

    Serialization and utility tools for the PulSeg intermediate representation, targeting the GE pge2 interpreter backend.

    HarmonizedMRI/pge2's past year of commit activity
    MATLAB 3 MIT 1 2 1 Updated Jul 23, 2026

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