{2025.06}[gompi/2025b] HMMER 3.4 by jpecar · Pull Request #1600 · EESSI/software-layer

jpecar · 2026-09-01T10:13:36Z

Another popular bioinfo tool

bedroge · 2026-09-01T10:15:19Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-aws · 2026-09-01T10:15:27Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192200

date	job status	comment
Sep 01 10:15:26 UTC 2026	submitted	job id `192200` awaits release by job manager
Sep 01 10:15:42 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 10:23:04 UTC 2026	running	job `192200` is running
Sep 01 10:44:44 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192200.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen2-17882591090.tar.zst` size: 4 MiB (4754314 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/amd/zen2/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod `HMMER/3.4-gompi-2025b/20260901_103810UTC` other under 2025.06/software/linux/x86_64/amd/zen2 no other files in tarball
Sep 01 10:44:44 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen2+default P: perf: 441.915 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen2+default P: perf: 447.883 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen2+default P: latency: 1.33 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen2+default P: latency: 2.07 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen2+default P: latency: 0.18 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen2+default P: bandwidth: 7978.22 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192200.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:08 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen2-17882591090.tar.zst` to S3 bucket succeeded

eessi-bot-deucalion · 2026-09-01T10:15:28Z

New job on instance eessi-bot-deucalion for repository eessi.io-2025.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2026.09/pr_1600/1862633

date	job status	comment
Sep 01 10:15:27 UTC 2026	submitted	job id `1862633` awaits release by job manager
Sep 01 10:16:03 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 10:17:06 UTC 2026	running	job `1862633` is running
Sep 01 10:48:02 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-1862633.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-a64fx-17882592850.tar.zst` size: 5 MiB (5864330 bytes) entries: 119 modules under 2025.06/software/linux/aarch64/a64fx/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/aarch64/a64fx/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/aarch64/a64fx/reprod `HMMER/3.4-gompi-2025b/20260901_104009UTC` other under 2025.06/software/linux/aarch64/a64fx no other files in tarball
Sep 01 10:48:02 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] (1/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ SKIP ] (2/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ OK ] (3/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:a64fx+default P: perf: 543.979 timesteps/s (r:0, l:None, u:None) [ OK ] (4/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:a64fx+default P: perf: 534.167 timesteps/s (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:a64fx+default P: latency: 0.87 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:a64fx+default P: bandwidth: 8036.41 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/6 test case(s) from 6 check(s) (0 failure(s), 2 skipped, 0 aborted) Details ✅ job output file `slurm-1862633.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:10 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-a64fx-17882592850.tar.zst` to S3 bucket succeeded

eessi-bot-jsc · 2026-09-01T10:15:31Z

New job on instance eessi-bot-jsc for repository eessi.io-2025.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2026.09/pr_1600/15579500

date	job status	comment
Sep 01 10:15:29 UTC 2026	submitted	job id `15579500` awaits release by job manager
Sep 01 10:15:49 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 10:16:53 UTC 2026	running	job `15579500` is running
Sep 01 10:38:41 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-15579500.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-nvidia-grace-17882587470.tar.gz` size: 10 MiB (11136911 bytes) entries: 119 modules under 2025.06/software/linux/aarch64/nvidia/grace/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/aarch64/nvidia/grace/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/aarch64/nvidia/grace/reprod `HMMER/3.4-gompi-2025b/20260901_103122UTC` other under 2025.06/software/linux/aarch64/nvidia/grace no other files in tarball
Sep 01 10:38:41 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite produced failures. ReFrame Summary [ FAILED ] Ran 18/30 test case(s) from 30 check(s) (4 failure(s), 12 skipped, 0 aborted) Details ✅ job output file `slurm-15579500.out` ❌ found message matching `ERROR:` ❌ found message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:11 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-nvidia-grace-17882587470.tar.gz` to S3 bucket succeeded

bedroge · 2026-09-01T11:54:01Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen3
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen4
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-aws-eu-south for:arch=x86_64/amd/zen5
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/skylake_avx512
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/haswell
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/icelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/cascadelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/sapphirerapids
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_n1
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1

eessi-bot-aws · 2026-09-01T11:54:09Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen3
Building for: x86_64/amd/zen3
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192201

date	job status	comment
Sep 01 11:54:07 UTC 2026	submitted	job id `192201` awaits release by job manager
Sep 01 11:54:39 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:00:18 UTC 2026	running	job `192201` is running
Sep 01 12:22:33 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192201.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen3-17882650050.tar.zst` size: 4 MiB (4747693 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/amd/zen3/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/amd/zen3/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/amd/zen3/reprod `HMMER/3.4-gompi-2025b/20260901_121616UTC` other under 2025.06/software/linux/x86_64/amd/zen3 no other files in tarball
Sep 01 12:22:33 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen3+default P: perf: 533.918 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen3+default P: perf: 529.945 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen3+default P: latency: 3.39 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen3+default P: latency: 1.09 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen3+default P: latency: 0.16 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen3+default P: bandwidth: 14474.75 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192201.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:17 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen3-17882650050.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:14Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen4
Building for: x86_64/amd/zen4
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192202

date	job status	comment
Sep 01 11:54:13 UTC 2026	submitted	job id `192202` awaits release by job manager
Sep 01 11:54:42 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 11:56:26 UTC 2026	running	job `192202` is running
Sep 01 12:11:46 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192202.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen4-17882643530.tar.zst` size: 4 MiB (4860218 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/amd/zen4/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/amd/zen4/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/amd/zen4/reprod `HMMER/3.4-gompi-2025b/20260901_120542UTC` other under 2025.06/software/linux/x86_64/amd/zen4 no other files in tarball
Sep 01 12:11:46 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen4+default P: perf: 1150.009 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen4+default P: perf: 1165.235 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen4+default P: latency: 1.42 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen4+default P: latency: 3.27 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen4+default P: latency: 0.15 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen4+default P: bandwidth: 14608.18 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192202.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:26 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen4-17882643530.tar.zst` to S3 bucket succeeded

eessi-bot-aws-eu-south · 2026-09-01T11:54:14Z

New job on instance eessi-bot-aws-eu-south for repository eessi.io-2025.06-software
Building on: amd-zen5
Building for: x86_64/amd/zen5
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/308

date	job status	comment
Sep 01 11:54:12 UTC 2026	submitted	job id `308` awaits release by job manager
Sep 01 11:54:24 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 11:55:34 UTC 2026	running	job `308` is running
Sep 01 12:09:14 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-308.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen5-17882644280.tar.zst` size: 4 MiB (4898750 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/amd/zen5/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/amd/zen5/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/amd/zen5/reprod `HMMER/3.4-gompi-2025b/20260901_120646UTC` other under 2025.06/software/linux/x86_64/amd/zen5 no other files in tarball
Sep 01 12:09:14 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen5+default P: perf: 1557.585 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-zen5+default P: perf: 1559.388 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen5+default P: latency: 1.3 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen5+default P: latency: 2.96 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen5+default P: latency: 0.17 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen5+default P: bandwidth: 45169.78 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-308.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:10 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen5-17882644280.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:20Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-skylake_avx512
Building for: x86_64/intel/skylake_avx512
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192203

date	job status	comment
Sep 01 11:54:19 UTC 2026	submitted	job id `192203` awaits release by job manager
Sep 01 11:54:53 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 11:56:32 UTC 2026	running	job `192203` is running
Sep 01 12:14:31 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192203.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17882646780.tar.zst` size: 4 MiB (4704696 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/intel/skylake_avx512/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/intel/skylake_avx512/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/intel/skylake_avx512/reprod `HMMER/3.4-gompi-2025b/20260901_121048UTC` other under 2025.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Sep 01 12:14:31 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-skylake+default P: perf: 433.897 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-skylake+default P: perf: 445.748 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-skylake+default P: latency: 1.17 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-skylake+default P: latency: 1.67 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-skylake+default P: latency: 0.24 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-skylake+default P: bandwidth: 10856.32 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192203.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:35 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17882646780.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:26Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-haswell
Building for: x86_64/intel/haswell
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192204

date	job status	comment
Sep 01 11:54:24 UTC 2026	submitted	job id `192204` awaits release by job manager
Sep 01 11:54:48 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 11:56:29 UTC 2026	running	job `192204` is running
Sep 01 12:13:11 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192204.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-haswell-17882644320.tar.zst` size: 4 MiB (4715912 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/intel/haswell/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/intel/haswell/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/intel/haswell/reprod `HMMER/3.4-gompi-2025b/20260901_120656UTC` other under 2025.06/software/linux/x86_64/intel/haswell no other files in tarball
Sep 01 12:13:11 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-haswell+default P: perf: 444.871 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-haswell+default P: perf: 452.882 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-haswell+default P: latency: 3.05 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-haswell+default P: latency: 2.19 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-haswell+default P: latency: 0.65 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-haswell+default P: bandwidth: 10327.24 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192204.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:44 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-haswell-17882644320.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:31Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-icelake
Building for: x86_64/intel/icelake
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192205

date	job status	comment
Sep 01 11:54:30 UTC 2026	submitted	job id `192205` awaits release by job manager
Sep 01 11:54:50 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:01:47 UTC 2026	running	job `192205` is running
Sep 01 12:14:29 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192205.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-icelake-17882646830.tar.zst` size: 4 MiB (4727086 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/intel/icelake/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/intel/icelake/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/intel/icelake/reprod `HMMER/3.4-gompi-2025b/20260901_121110UTC` other under 2025.06/software/linux/x86_64/intel/icelake no other files in tarball
Sep 01 12:14:29 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-icelake+default P: perf: 434.34 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-icelake+default P: perf: 552.183 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-icelake+default P: latency: 0.98 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-icelake+default P: latency: 1.53 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-icelake+default P: latency: 0.24 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-icelake+default P: bandwidth: 13755.54 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192205.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:44:53 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-icelake-17882646830.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:36Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-cascadelake
Building for: x86_64/intel/cascadelake
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192206

date	job status	comment
Sep 01 11:54:35 UTC 2026	submitted	job id `192206` awaits release by job manager
Sep 01 11:54:45 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:00:24 UTC 2026	running	job `192206` is running
Sep 01 12:22:35 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192206.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17882650020.tar.zst` size: 4 MiB (4704922 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/intel/cascadelake/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/intel/cascadelake/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/intel/cascadelake/reprod `HMMER/3.4-gompi-2025b/20260901_121610UTC` other under 2025.06/software/linux/x86_64/intel/cascadelake no other files in tarball
Sep 01 12:22:35 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-cascadelake+default P: perf: 407.134 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-cascadelake+default P: perf: 422.156 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-cascadelake+default P: latency: 1.21 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-cascadelake+default P: latency: 1.9 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-cascadelake+default P: latency: 0.25 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-cascadelake+default P: bandwidth: 10118.69 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192206.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:03 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17882650020.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:42Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-sapphirerapids
Building for: x86_64/intel/sapphirerapids
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192207

date	job status	comment
Sep 01 11:54:40 UTC 2026	submitted	job id `192207` awaits release by job manager
Sep 01 11:56:17 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:07:35 UTC 2026	running	job `192207` is running
Sep 01 12:42:11 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192207.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17882663340.tar.zst` size: 4 MiB (4727868 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/intel/sapphirerapids/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/intel/sapphirerapids/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/intel/sapphirerapids/reprod `HMMER/3.4-gompi-2025b/20260901_123823UTC` other under 2025.06/software/linux/x86_64/intel/sapphirerapids no other files in tarball
Sep 01 12:42:11 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-sapphirerapids+default P: perf: 559.339 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-sapphirerapids+default P: perf: 577.328 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.47 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.58 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-sapphirerapids+default P: latency: 0.35 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-sapphirerapids+default P: bandwidth: 12584.9 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192207.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:13 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17882663340.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:47Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: x86_64/generic
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192208

date	job status	comment
Sep 01 11:54:45 UTC 2026	submitted	job id `192208` awaits release by job manager
Sep 01 11:56:14 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 11:57:46 UTC 2026	running	job `192208` is running
Sep 01 12:08:59 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192208.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-generic-17882643890.tar.zst` size: 4 MiB (4545535 bytes) entries: 119 modules under 2025.06/software/linux/x86_64/generic/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/x86_64/generic/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/x86_64/generic/reprod `HMMER/3.4-gompi-2025b/20260901_120612UTC` other under 2025.06/software/linux/x86_64/generic no other files in tarball
Sep 01 12:08:59 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-generic+default P: perf: 455.141 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:x86-64-generic+default P: perf: 447.068 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-generic+default P: latency: 2.59 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-generic+default P: latency: 2.22 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-generic+default P: latency: 0.63 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-generic+default P: bandwidth: 10567.97 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192208.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:22 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-generic-17882643890.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:52Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192209

date	job status	comment
Sep 01 11:54:51 UTC 2026	submitted	job id `192209` awaits release by job manager
Sep 01 11:56:05 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:03:02 UTC 2026	running	job `192209` is running
Sep 01 12:17:53 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192209.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17882648750.tar.zst` size: 4 MiB (5021767 bytes) entries: 119 modules under 2025.06/software/linux/aarch64/generic/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/aarch64/generic/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `HMMER/3.4-gompi-2025b/20260901_121404UTC` other under 2025.06/software/linux/aarch64/generic no other files in tarball
Sep 01 12:17:53 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-generic+default P: perf: 661.815 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-generic+default P: perf: 659.108 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 2.01 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.53 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15123.02 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192209.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:31 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-generic-17882648750.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:54:57Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_n1
Building for: aarch64/neoverse_n1
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192210

date	job status	comment
Sep 01 11:54:56 UTC 2026	submitted	job id `192210` awaits release by job manager
Sep 01 11:56:08 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:04:27 UTC 2026	running	job `192210` is running
Sep 01 12:21:02 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192210.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_n1-17882649040.tar.zst` size: 4 MiB (5011126 bytes) entries: 119 modules under 2025.06/software/linux/aarch64/neoverse_n1/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/aarch64/neoverse_n1/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/aarch64/neoverse_n1/reprod `HMMER/3.4-gompi-2025b/20260901_121432UTC` other under 2025.06/software/linux/aarch64/neoverse_n1 no other files in tarball
Sep 01 12:21:02 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_n1+default P: perf: 662.048 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-neoverse_n1+default P: perf: 651.637 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_n1+default P: latency: 1.92 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_n1+default P: latency: 5.37 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_n1+default P: latency: 0.28 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_n1+default P: bandwidth: 16253.13 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192210.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:40 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_n1-17882649040.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-09-01T11:55:03Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2026.09/pr_1600/192211

date	job status	comment
Sep 01 11:55:02 UTC 2026	submitted	job id `192211` awaits release by job manager
Sep 01 11:56:11 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 01 12:04:30 UTC 2026	running	job `192211` is running
Sep 01 12:16:15 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-192211.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_v1-17882648510.tar.zst` size: 4 MiB (4934569 bytes) entries: 119 modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all `HMMER/3.4-gompi-2025b.lua` software under 2025.06/software/linux/aarch64/neoverse_v1/software `HMMER/3.4-gompi-2025b` reprod directories under 2025.06/software/linux/aarch64/neoverse_v1/reprod `HMMER/3.4-gompi-2025b/20260901_121343UTC` other under 2025.06/software/linux/aarch64/neoverse_v1 no other files in tarball
Sep 01 12:16:15 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_v1+default P: perf: 958.997 timesteps/s (r:0, l:None, u:None) [ OK ] (2/6) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025_update4-foss-2025b-kokkos %scale=1_node /e121eb9c @BotBuildTests:aarch64-neoverse_v1+default P: perf: 939.962 timesteps/s (r:0, l:None, u:None) [ OK ] (3/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_v1+default P: latency: 1.61 us (r:0, l:None, u:None) [ OK ] (4/6) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_v1+default P: latency: 6.59 us (r:0, l:None, u:None) [ OK ] (5/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_v1+default P: latency: 0.24 us (r:0, l:None, u:None) [ OK ] (6/6) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_v1+default P: bandwidth: 28340.2 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-192211.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 01 12:45:49 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_v1-17882648510.tar.zst` to S3 bucket succeeded

ocaisa

LGTM

bedroge · 2026-09-01T14:08:22Z

Staging PR merged

{2025.06}[gompi/2025b] HMMER 3.4

3c85a1d

bedroge approved these changes Sep 1, 2026

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bedroge added 2025.06-software.eessi.io 2025.06 version of software.eessi.io bot:deploy Ask bot to deploy missing software installations to EESSI labels Sep 1, 2026

ocaisa approved these changes Sep 1, 2026

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bedroge merged commit e4eee50 into EESSI:main Sep 1, 2026
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