diff --git a/docs/reference/config.md b/docs/reference/config.md
index bf9990403..d7edc0253 100644
--- a/docs/reference/config.md
+++ b/docs/reference/config.md
@@ -274,6 +274,10 @@ So `glob = "projects/*/*.jsonl"` in `~/.claude/.dirsql.toml` indexes
 writes `glob = "~/.claude/projects/*/*.jsonl"`. A table's `path` and `dir`
 columns, `{root}`, and `ignore` are all relative to its anchor.
 
+A table whose glob matches no files prints
+`dirsql: table 'sessions': glob 'projects/*/*.jsonl' matched no files under <anchor>`
+to stderr; the exit code is unchanged. Path-tables and programmatic tables do not warn.
+
 ### Batch `ddl`
 
 `ddl` is handed to SQLite whole, so a table declaration is not limited to one
diff --git a/packages/python/changelog.d/2026-10-06-zero-match-config-table-warning.md b/packages/python/changelog.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..7f9b45fbd
--- /dev/null
+++ b/packages/python/changelog.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,3 @@
+**Added**
+
+- **A config `[[table]]` whose glob matches no files now prints a warning to stderr.** `dirsql: table 'sessions': glob 'projects/*/*.jsonl' matched no files under /home/u/.claude` names the table, the glob and the directory it was matched under, so a glob that silently indexes nothing is visible. The exit code is unchanged, and path-tables and programmatic tables do not warn. (#1232)
diff --git a/packages/python/e2e-attestations/claude-1232-zero-match.json b/packages/python/e2e-attestations/claude-1232-zero-match.json
new file mode 100644
index 000000000..f2d73964a
--- /dev/null
+++ b/packages/python/e2e-attestations/claude-1232-zero-match.json
@@ -0,0 +1,7 @@
+{
+  "command": "uv run python -m pytest tests/e2e/fanout_test.py tests/e2e/capture_collision_test.py tests/e2e/declared_table_name_test.py tests/e2e/extension_package_test.py tests/e2e/plugin_discovery_test.py tests/e2e/use_case_notebook_test.py tests/e2e/on_file_query_test.py tests/e2e/use_case_transcripts_test.py tests/e2e/plugin_extension_discovery_test.py tests/e2e/use_case_join_test.py tests/e2e/use_case_dossier_test.py tests/e2e/sigint_interrupt_test.py tests/e2e/query_contract_test.py -x -q",
+  "ran_at": 1791306078,
+  "exit_code": 0,
+  "commit": "8b587de39902adf33e4ebaa957a8fd0005875029",
+  "branch": "claude/1232-zero-match"
+}
diff --git a/packages/python/migrations.d/2026-10-06-zero-match-config-table-warning.md b/packages/python/migrations.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..dac9ce1d0
--- /dev/null
+++ b/packages/python/migrations.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,25 @@
+### Empty config tables warn on stderr (#1232)
+
+#### Summary
+
+A config `[[table]]` whose glob matches no files writes one line to stderr at startup. Nothing else changes: the query still runs and the exit code is the same.
+
+#### Required changes
+
+_None._ A script that treats any stderr output as failure should fix the glob or drop the table.
+
+#### Deprecations removed
+
+_None._
+
+#### Behavior changes without code changes
+
+- stderr gains `dirsql: table '<name>': glob '<glob>' matched no files under <anchor>` for each config table that matched nothing.
+
+#### Verification
+
+```bash
+mkdir -p /tmp/cfg /tmp/elsewhere
+printf '[[table]]\nname = "t"\nddl = "CREATE TABLE t (n TEXT)"\nglob = "nothing/*.jsonl"\non-file = "printf []"\n' > /tmp/cfg/.dirsql.toml
+cd /tmp/elsewhere && dirsql query "SELECT COUNT(*) AS n FROM t" -c /tmp/cfg/.dirsql.toml   # stderr: dirsql: table 't': glob 'nothing/*.jsonl' matched no files under /tmp/cfg
+```
diff --git a/packages/rust/changelog.d/2026-10-06-zero-match-config-table-warning.md b/packages/rust/changelog.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..7f9b45fbd
--- /dev/null
+++ b/packages/rust/changelog.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,3 @@
+**Added**
+
+- **A config `[[table]]` whose glob matches no files now prints a warning to stderr.** `dirsql: table 'sessions': glob 'projects/*/*.jsonl' matched no files under /home/u/.claude` names the table, the glob and the directory it was matched under, so a glob that silently indexes nothing is visible. The exit code is unchanged, and path-tables and programmatic tables do not warn. (#1232)
diff --git a/packages/rust/migrations.d/2026-10-06-zero-match-config-table-warning.md b/packages/rust/migrations.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..dac9ce1d0
--- /dev/null
+++ b/packages/rust/migrations.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,25 @@
+### Empty config tables warn on stderr (#1232)
+
+#### Summary
+
+A config `[[table]]` whose glob matches no files writes one line to stderr at startup. Nothing else changes: the query still runs and the exit code is the same.
+
+#### Required changes
+
+_None._ A script that treats any stderr output as failure should fix the glob or drop the table.
+
+#### Deprecations removed
+
+_None._
+
+#### Behavior changes without code changes
+
+- stderr gains `dirsql: table '<name>': glob '<glob>' matched no files under <anchor>` for each config table that matched nothing.
+
+#### Verification
+
+```bash
+mkdir -p /tmp/cfg /tmp/elsewhere
+printf '[[table]]\nname = "t"\nddl = "CREATE TABLE t (n TEXT)"\nglob = "nothing/*.jsonl"\non-file = "printf []"\n' > /tmp/cfg/.dirsql.toml
+cd /tmp/elsewhere && dirsql query "SELECT COUNT(*) AS n FROM t" -c /tmp/cfg/.dirsql.toml   # stderr: dirsql: table 't': glob 'nothing/*.jsonl' matched no files under /tmp/cfg
+```
diff --git a/packages/rust/src/lib.rs b/packages/rust/src/lib.rs
index cb1fdbec8..7e9e0434c 100644
--- a/packages/rust/src/lib.rs
+++ b/packages/rust/src/lib.rs
@@ -285,6 +285,7 @@ pub struct Table {
     hook: Hook,
     anchor: Option<PathBuf>,
     ignore: Vec<String>,
+    warn_when_empty: bool,
 }
 
 impl Table {
@@ -298,6 +299,11 @@ impl Table {
         &self.ignore
     }
 
+    pub(crate) fn warning_when_empty(mut self) -> Self {
+        self.warn_when_empty = true;
+        self
+    }
+
     pub(crate) fn scoped_ignore(mut self, ignore: Vec<String>) -> Self {
         self.ignore = ignore;
         self
@@ -354,6 +360,7 @@ impl Table {
             strict: false,
             anchor: None,
             ignore: Vec::new(),
+            warn_when_empty: false,
         }
     }
 
@@ -400,6 +407,7 @@ impl Table {
             strict: false,
             anchor: None,
             ignore: Vec::new(),
+            warn_when_empty: false,
         }
     }
 }
@@ -1128,6 +1136,9 @@ impl DirSQL {
             let mut progress = Progress::scanning();
             let (scanned, seen) = scan_groups(&groups, scan, &mut progress);
             progress.finish(seen);
+            for warning in empty_table_warnings(&tables, &anchors, &scanned) {
+                eprintln!("{warning}");
+            }
             scanned
         };
 
@@ -2019,6 +2030,28 @@ fn compile_groups(
     Ok((groups, anchors, names))
 }
 
+/// One stderr line per config table that matched no file in the scan, naming
+/// the table, its glob and the directory the glob was matched under.
+fn empty_table_warnings(
+    tables: &[Table],
+    anchors: &TableAnchors,
+    scanned: &[(PathBuf, String)],
+) -> Vec<String> {
+    tables
+        .iter()
+        .filter(|table| table.warn_when_empty)
+        .filter(|table| !scanned.iter().any(|(_, name)| *name == table.name))
+        .map(|table| {
+            format!(
+                "dirsql: table '{}': glob '{}' matched no files under {}",
+                table.name,
+                table.glob,
+                anchors.of(&table.name).display()
+            )
+        })
+        .collect()
+}
+
 /// Open (or create) the persistent SQLite cache and read its meta. If the
 /// meta is missing or incompatible with the current build, the resulting
 /// [`PersistContext`] carries an empty file index and asks for a sweep, so
@@ -2423,7 +2456,8 @@ fn build_tables_from_config(cfg: &config::Config, config_dir: &Path) -> Result<V
             },
         )
         .anchored(anchor)
-        .scoped_ignore(cfg.ignore.clone());
+        .scoped_ignore(cfg.ignore.clone())
+        .warning_when_empty();
 
         if table_cfg.strict == Some(true) {
             table.strict = true;
@@ -5451,6 +5485,31 @@ mod internal_tests {
         assert!(matches!(err, DirSqlError::DuplicateTable(ref name) if name == "a"));
     }
 
+    #[test]
+    fn an_empty_warning_table_is_named_with_its_glob_and_anchor() {
+        let tables = vec![anchored_table("a", "*.txt", "/one").warning_when_empty()];
+        let anchors = compile_groups(&tables, &[], Path::new("/idx")).unwrap().1;
+        assert_eq!(
+            empty_table_warnings(&tables, &anchors, &[]),
+            vec!["dirsql: table 'a': glob '*.txt' matched no files under /one".to_string()]
+        );
+    }
+
+    #[test]
+    fn a_table_with_a_matched_file_does_not_warn() {
+        let tables = vec![anchored_table("a", "*.txt", "/one").warning_when_empty()];
+        let anchors = compile_groups(&tables, &[], Path::new("/idx")).unwrap().1;
+        let scanned = vec![(PathBuf::from("/one/x.txt"), "a".to_string())];
+        assert!(empty_table_warnings(&tables, &anchors, &scanned).is_empty());
+    }
+
+    #[test]
+    fn a_programmatic_empty_table_does_not_warn() {
+        let tables = vec![anchored_table("a", "*.txt", "/one")];
+        let anchors = compile_groups(&tables, &[], Path::new("/idx")).unwrap().1;
+        assert!(empty_table_warnings(&tables, &anchors, &[]).is_empty());
+    }
+
     #[test]
     fn anchors_of_an_unknown_table_is_the_index_root() {
         let anchors = TableAnchors::at_root(Path::new("/idx"));
diff --git a/packages/rust/tests/cli_zero_match_warning.rs b/packages/rust/tests/cli_zero_match_warning.rs
new file mode 100644
index 000000000..68b3aa6ec
--- /dev/null
+++ b/packages/rust/tests/cli_zero_match_warning.rs
@@ -0,0 +1,71 @@
+//! A config `[[table]]` whose glob matches no files warns on stderr, naming the
+//! table, the glob and the anchor. The exit code is unchanged.
+//!
+//! Gated behind `--features cli` like the sibling CLI e2e tests.
+#![cfg(feature = "cli")]
+
+use std::fs;
+use std::path::Path;
+
+use assert_cmd::prelude::*;
+use tempfile::TempDir;
+
+fn write_config(dir: &Path, glob: &str) -> std::path::PathBuf {
+    let path = dir.join(".dirsql.toml");
+    fs::write(
+        &path,
+        format!(
+            "[[table]]\nname = \"sessions\"\nddl = \"CREATE TABLE sessions (n TEXT)\"\nglob = \"{glob}\"\non-file = \"printf []\"\n"
+        ),
+    )
+    .unwrap();
+    path
+}
+
+fn query(cwd: &Path, config: &Path) -> std::process::Output {
+    std::process::Command::cargo_bin("dirsql")
+        .expect("`dirsql` binary must be built by `cargo test` with --features cli")
+        .arg("query")
+        .arg("SELECT COUNT(*) AS n FROM sessions")
+        .arg("-c")
+        .arg(config)
+        .current_dir(cwd)
+        .output()
+        .unwrap()
+}
+
+#[test]
+fn an_empty_config_table_warns_on_stderr_and_still_exits_zero() {
+    let cfg_dir = TempDir::new().unwrap();
+    let cfg_dir_path = fs::canonicalize(cfg_dir.path()).unwrap();
+    let config = write_config(&cfg_dir_path, "projects/*/*.jsonl");
+    let elsewhere = TempDir::new().unwrap();
+
+    let out = query(elsewhere.path(), &config);
+
+    assert!(out.status.success(), "{out:?}");
+    let stderr = String::from_utf8_lossy(&out.stderr);
+    let expected = format!(
+        "dirsql: table 'sessions': glob 'projects/*/*.jsonl' matched no files under {}",
+        cfg_dir_path.display()
+    );
+    assert!(
+        stderr.lines().any(|line| line == expected),
+        "expected {expected:?} in stderr, got {stderr:?}"
+    );
+}
+
+#[test]
+fn a_config_table_with_matches_does_not_warn() {
+    let cfg_dir = TempDir::new().unwrap();
+    fs::create_dir_all(cfg_dir.path().join("projects/p")).unwrap();
+    fs::write(cfg_dir.path().join("projects/p/a.jsonl"), "{}").unwrap();
+    let config = write_config(cfg_dir.path(), "projects/*/*.jsonl");
+    let elsewhere = TempDir::new().unwrap();
+
+    let out = query(elsewhere.path(), &config);
+
+    assert!(out.status.success(), "{out:?}");
+    let stderr = String::from_utf8_lossy(&out.stderr);
+    assert!(!stderr.contains("matched no files"), "got {stderr:?}");
+}
diff --git a/packages/ts/changelog.d/2026-10-06-zero-match-config-table-warning.md b/packages/ts/changelog.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..7f9b45fbd
--- /dev/null
+++ b/packages/ts/changelog.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,3 @@
+**Added**
+
+- **A config `[[table]]` whose glob matches no files now prints a warning to stderr.** `dirsql: table 'sessions': glob 'projects/*/*.jsonl' matched no files under /home/u/.claude` names the table, the glob and the directory it was matched under, so a glob that silently indexes nothing is visible. The exit code is unchanged, and path-tables and programmatic tables do not warn. (#1232)
diff --git a/packages/ts/e2e-attestations/claude-1232-zero-match.json b/packages/ts/e2e-attestations/claude-1232-zero-match.json
new file mode 100644
index 000000000..b9e89b644
--- /dev/null
+++ b/packages/ts/e2e-attestations/claude-1232-zero-match.json
@@ -0,0 +1,7 @@
+{
+  "command": "pnpm test:e2e",
+  "ran_at": 1791306118,
+  "exit_code": 0,
+  "commit": "055602415dffd51c3aa8145b39f5d9b0e8988590",
+  "branch": "claude/1232-zero-match"
+}
diff --git a/packages/ts/migrations.d/2026-10-06-zero-match-config-table-warning.md b/packages/ts/migrations.d/2026-10-06-zero-match-config-table-warning.md
new file mode 100644
index 000000000..dac9ce1d0
--- /dev/null
+++ b/packages/ts/migrations.d/2026-10-06-zero-match-config-table-warning.md
@@ -0,0 +1,25 @@
+### Empty config tables warn on stderr (#1232)
+
+#### Summary
+
+A config `[[table]]` whose glob matches no files writes one line to stderr at startup. Nothing else changes: the query still runs and the exit code is the same.
+
+#### Required changes
+
+_None._ A script that treats any stderr output as failure should fix the glob or drop the table.
+
+#### Deprecations removed
+
+_None._
+
+#### Behavior changes without code changes
+
+- stderr gains `dirsql: table '<name>': glob '<glob>' matched no files under <anchor>` for each config table that matched nothing.
+
+#### Verification
+
+```bash
+mkdir -p /tmp/cfg /tmp/elsewhere
+printf '[[table]]\nname = "t"\nddl = "CREATE TABLE t (n TEXT)"\nglob = "nothing/*.jsonl"\non-file = "printf []"\n' > /tmp/cfg/.dirsql.toml
+cd /tmp/elsewhere && dirsql query "SELECT COUNT(*) AS n FROM t" -c /tmp/cfg/.dirsql.toml   # stderr: dirsql: table 't': glob 'nothing/*.jsonl' matched no files under /tmp/cfg
+```