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Only send set fields in database and table update requests
The update requests always sent isCertified, so an item whose certified
value was never set sent isCertified="none". description and
certificationNote were only sent when non-empty, so they could not be
cleared. Send isCertified when certified is not None, and send
description and certificationNote whenever they are not None so an empty
string clears them.
The Update Database REST method accepts contentPermissions and the
docstring claims it can set permissions, but the value was never sent.
Send it when set.
Refs #735
Co-Authored-By: Claude Code <noreply@anthropic.com>
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