diff --git a/.github/scripts/docs-postprocess.py b/.github/scripts/docs-postprocess.py new file mode 100644 index 00000000..9fb28214 --- /dev/null +++ b/.github/scripts/docs-postprocess.py @@ -0,0 +1,123 @@ +"""Correct two things great-docs bakes into the built Python docs site. + +**Absolute icon links.** great-docs writes the favicon `` hrefs against +`site_url`, so every page points at the published site. They resolve to the +wrong place, or to nothing, when the same build is served from anywhere else: +a pull request preview under `pr-/py/`, a local preview, or a versioned copy +under `v//`. The generated icons sit at the root of each copy, so Quarto's +own per-page offset is the right prefix. + +**Source links missing the package directory.** They are built relative to the +package root, which in this monorepo is `pkg-py/` rather than the repository +root, so every "source" button pointed at a path that does not exist. + +**The navbar version badge.** great-docs derives it from the newest GitHub +Release for the whole repository and cannot filter by tag prefix, so in this +monorepo it shows whichever of the two release series published last. The +version selector already names the version, from the list in great-docs.yml, +so the badge is removed rather than corrected. + +Remove the corresponding half of this script if great-docs gains relative icon +links, or a way to suppress the badge. + +Usage: docs-postprocess.py +""" + +from __future__ import annotations + +import pathlib +import re +import sys + +# The closing quote after the class name is what stops a longer class that +# merely starts the same way, such as version-badge-legend, from matching. +BADGE = re.compile(r'\s*]*>[^<]*') + +OFFSET = re.compile(r' tags are rewritten. great-docs also injects a canonical-URL +# script whose base is the site URL, which it concatenates with a path at +# runtime; turning that into a page-relative prefix would yield a bogus +# canonical URL on every non-latest version. +LINK = re.compile(r"]*>") + +# Source links are built relative to the package root, which in a monorepo is +# not the repository root, so they arrive missing the package directory. The +# `source.path` config key cannot do this: it replaces the whole path with the +# file's basename, which flattens nested modules such as commons/_ui/_server.py. +# Scoped to this repository, so a documentation link into another project's +# src/ tree is left alone. The non-greedy group is the git ref, which may +# itself contain slashes. +def source_pattern(repo_url: str) -> re.Pattern[str]: + repo = repo_url.rstrip("/") + return re.compile(re.escape(repo) + r'/blob/([^"]+?)(/src/)') + + +def fix( + text: str, site_url: str, repo_url: str, package_root: str, offset: str +) -> str | None: + """Return `text` post-processed, or None when it needs no change. + + Returns None when the page needs neither, which keeps the caller from + rewriting a file it does not have to touch and makes this idempotent. + """ + base = site_url if site_url.endswith("/") else site_url + "/" + prefix = offset if offset.endswith("/") else offset + "/" + + icons = 0 + + def relativize(match: re.Match[str]) -> str: + nonlocal icons + tag, n = re.subn( + r'(?<=href=")' + re.escape(base), prefix, match.group(0) + ) + icons += n + return tag + + repo = repo_url.rstrip("/") + + def relocate(match: re.Match[str]) -> str: + ref = match.group(1) + # Already carries the package directory, so leave it be. + if ref == package_root or ref.endswith("/" + package_root): + return match.group(0) + return f"{repo}/blob/{ref}/{package_root}{match.group(2)}" + + patched = LINK.sub(relativize, text) + patched, badges = BADGE.subn("", patched) + patched, sources = source_pattern(repo_url).subn(relocate, patched) + + if not (icons or badges or sources) or patched == text: + return None + return patched + + +def main(root: str, site_url: str, repo_url: str, package_root: str) -> int: + directory = pathlib.Path(root) + if not directory.is_dir(): + print(f"{root} is not a directory", file=sys.stderr) + return 1 + + changed = skipped = 0 + for path in sorted(directory.rglob("*.html")): + text = path.read_text(encoding="utf-8", errors="surrogateescape") + # Each page carries the offset to its own copy's root, which is what + # makes this correct inside a versioned copy as well as at the top. + found = OFFSET.search(text) + offset = found.group(1) if found else "./" + patched = fix(text, site_url, repo_url, package_root, offset) + if patched is None: + skipped += 1 + continue + path.write_text(patched, encoding="utf-8", errors="surrogateescape") + changed += 1 + + print(f"Post-processed {changed} page(s), skipped {skipped}.") + return 0 + + +if __name__ == "__main__": + if len(sys.argv) != 5: + print(__doc__, file=sys.stderr) + raise SystemExit(2) + raise SystemExit(main(sys.argv[1], sys.argv[2], sys.argv[3], sys.argv[4])) diff --git a/.github/scripts/test_docs_postprocess.py b/.github/scripts/test_docs_postprocess.py new file mode 100644 index 00000000..62321f29 --- /dev/null +++ b/.github/scripts/test_docs_postprocess.py @@ -0,0 +1,166 @@ +"""Tests for docs-postprocess.py. Run: python3 test_docs_postprocess.py""" + +import importlib.util +import pathlib +import unittest + +spec = importlib.util.spec_from_file_location( + "docs_postprocess", pathlib.Path(__file__).parent / "docs-postprocess.py" +) +assert spec and spec.loader +mod = importlib.util.module_from_spec(spec) +spec.loader.exec_module(mod) + +fix = mod.fix +BASE = "https://posit-dev.github.io/commons/py/" +ROOT = "pkg-py" +REPO = "https://github.com/posit-dev/commons" +BLOB = REPO + "/blob" + + +class StripVersionBadgeTest(unittest.TestCase): + def test_removes_the_badge(self): + page = 'commons v0.1.0.dev1' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertNotIn("version-badge", out) + self.assertNotIn("v0.1.0.dev1", out) + # The space before the badge goes with it, leaving no dangling gap. + self.assertIn(">commons", out) + + def test_removes_the_badge_with_attributes(self): + page = 'v0.1.0.dev1' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertEqual(out.strip(), "") + + def test_leaves_a_longer_class_alone(self): + # Anchored on the closing quote, so version-badge-legend is not a badge. + page = 'v1' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "./")) + + +class RelativizeIconsTest(unittest.TestCase): + def test_rewrites_an_absolute_icon_link_at_the_root(self): + page = f'' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertIn('href="./favicon.ico"', out) + self.assertNotIn(BASE, out) + + def test_rewrites_with_a_nested_offset(self): + page = f'' + out = fix(page, BASE, REPO, ROOT, "../") + assert out is not None + self.assertIn('href="../apple-touch-icon.png"', out) + + def test_rewrites_every_occurrence(self): + page = ( + f'' + f'' + ) + out = fix(page, BASE, REPO, ROOT, "../") + assert out is not None + self.assertEqual(out.count("../favicon-"), 2) + self.assertNotIn(BASE, out) + + def test_tolerates_a_base_without_a_trailing_slash(self): + page = f'' + out = fix(page, BASE.rstrip("/"), REPO, ROOT, "../") + assert out is not None + self.assertIn('href="../favicon.ico"', out) + + def test_leaves_the_versioned_canonical_script_alone(self): + # great-docs injects a canonical-URL script whose base is the site URL + # without a trailing slash, and builds a path onto it at runtime. + # Rewriting it to a page-relative prefix would produce a bogus + # canonical URL on every non-latest version. + page = '' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "../")) + + def test_leaves_a_script_using_the_trailing_slash_form_alone(self): + # Same risk, one character different: only hrefs are rewritten. + page = f'' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "../")) + + def test_rewrites_the_link_but_not_a_neighbouring_script(self): + page = ( + f'' + f'' + ) + out = fix(page, BASE, REPO, ROOT, "../") + assert out is not None + self.assertIn('href="../favicon.ico"', out) + self.assertIn(f'var base="{BASE}";', out) + + def test_leaves_an_unrelated_absolute_url_alone(self): + page = 'PyPI' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "../")) + + def test_leaves_a_page_needing_nothing(self): + self.assertIsNone(fix("plain", BASE, REPO, ROOT, "./")) + + def test_is_idempotent(self): + page = ( + f'' + 'v1' + ) + once = fix(page, BASE, REPO, ROOT, "../") + assert once is not None + self.assertIsNone(fix(once, BASE, REPO, ROOT, "../")) + + def test_does_both_jobs_in_one_pass(self): + page = ( + f'' + 'v0.1.0.dev1' + ) + out = fix(page, BASE, REPO, ROOT, "../") + assert out is not None + self.assertIn('href="../favicon.ico"', out) + self.assertNotIn("version-badge", out) + + +class SourceLinkTest(unittest.TestCase): + def test_inserts_the_package_root(self): + page = f'source' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertIn(f"{BLOB}/main/pkg-py/src/commons/_agent.py#L58-L368", out) + + def test_keeps_a_nested_module_path(self): + # source.path would have flattened this to the basename, which is why + # the prefix is inserted here instead of configured there. + page = f'source' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertIn(f"{BLOB}/main/pkg-py/src/commons/_ui/_server.py", out) + + def test_handles_a_ref_containing_slashes(self): + page = f'source' + out = fix(page, BASE, REPO, ROOT, "./") + assert out is not None + self.assertIn(f"{BLOB}/jat255/some-branch/pkg-py/src/commons/_agent.py", out) + + def test_is_idempotent_on_source_links(self): + page = f'source' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "./")) + + def test_leaves_another_repository_alone(self): + # Only this repository's generated links need the package directory; + # a link into someone else's src/ tree must be untouched. + page = 'x' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "./")) + + def test_tolerates_a_repo_url_with_a_trailing_slash(self): + page = f'source' + out = fix(page, BASE, REPO + "/", ROOT, "./") + assert out is not None + self.assertIn("/main/pkg-py/src/commons/_agent.py", out) + + def test_leaves_a_non_source_repo_link_alone(self): + page = f'issue' + self.assertIsNone(fix(page, BASE, REPO, ROOT, "./")) + + +if __name__ == "__main__": + unittest.main(verbosity=2) \ No newline at end of file diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml index c050dbd8..039a5a5e 100644 --- a/.github/workflows/pkgdown.yaml +++ b/.github/workflows/pkgdown.yaml @@ -21,7 +21,7 @@ jobs: run: working-directory: pkg-r # Only restrict concurrency for non-PR jobs: those share gh-pages, and a - # PR build deploys nothing. Races against quartodoc.yaml's deploy are + # PR build deploys nothing. Races against py-docs.yaml's deploy are # handled at the push instead, by the deploy action's rebase. concurrency: group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} diff --git a/.github/workflows/preview-cleanup.yml b/.github/workflows/preview-cleanup.yml index 0598b2f3..c724e346 100644 --- a/.github/workflows/preview-cleanup.yml +++ b/.github/workflows/preview-cleanup.yml @@ -1,4 +1,4 @@ -# Removes the pr-/ preview folders that quartodoc.yaml publishes to +# Removes the pr-/ preview folders that py-docs.yaml publishes to # gh-pages. # # Closing a pull request handles the ordinary case immediately. The schedule diff --git a/.github/workflows/preview-fork-notice.yml b/.github/workflows/preview-fork-notice.yml index eabe5a98..45b2f962 100644 --- a/.github/workflows/preview-fork-notice.yml +++ b/.github/workflows/preview-fork-notice.yml @@ -1,6 +1,6 @@ # Tells a fork's author why their pull request has no documentation preview. # -# quartodoc.yaml skips the preview deploy for forks, and a fork's +# py-docs.yaml skips the preview deploy for forks, and a fork's # GITHUB_TOKEN is read-only, so that workflow cannot post this itself. # pull_request_target runs with the base repository's token, which can. This workflow never checks out the pull request, and asks for no # permission beyond writing the comment, so none of what makes diff --git a/.github/workflows/quartodoc.yaml b/.github/workflows/py-docs.yaml similarity index 76% rename from .github/workflows/quartodoc.yaml rename to .github/workflows/py-docs.yaml index bbf095cc..fcae3228 100644 --- a/.github/workflows/quartodoc.yaml +++ b/.github/workflows/py-docs.yaml @@ -1,19 +1,20 @@ on: push: branches: [main] - paths: [pkg-py/**, docs/**, .github/workflows/quartodoc.yaml] + # paths does not filter a tag push, so a release rebuilds the site + # whatever it touched, which is what a release should do. + tags: ["py-v*"] + paths: [pkg-py/**, docs/**, .github/scripts/docs-postprocess.py, .github/workflows/py-docs.yaml] pull_request: - paths: [pkg-py/**, docs/**, .github/workflows/quartodoc.yaml] - release: - types: [published] + paths: [pkg-py/**, docs/**, .github/scripts/docs-postprocess.py, .github/workflows/py-docs.yaml] workflow_dispatch: -name: quartodoc.yaml +name: Python documentation build permissions: read-all jobs: - quartodoc: + py-docs: runs-on: ubuntu-latest defaults: run: @@ -25,7 +26,7 @@ jobs: # Races between the two sites are handled at the push instead, by the # deploy action's rebase. concurrency: - group: quartodoc-${{ github.event.number || github.ref }} + group: py-docs-${{ github.event.number || github.ref }} permissions: contents: write pull-requests: write @@ -41,13 +42,17 @@ jobs: - name: Install the package and its docs dependencies run: uv sync --extra shiny --group docs - - name: Build the reference pages - working-directory: pkg-py/docs - run: uv run quartodoc build + - name: Build the site + working-directory: pkg-py + run: uv run great-docs build - - name: Render the site - working-directory: pkg-py/docs - run: uv run quarto render + # Relativizes the favicon links great-docs writes against site_url, and + # drops its version badge. See the script for why each is needed. + - name: Post-process the built site + working-directory: pkg-py + run: | + read -r site_url repo_url < <(uv run python -c 'import yaml; c = yaml.safe_load(open("great-docs.yml")); print(c["site_url"], c["repo"])') + python3 ../.github/scripts/docs-postprocess.py great-docs/_site "$site_url" "$repo_url" pkg-py # The deploy publishes the whole of docs/, so the rendered site has to # sit at the path it is served from. @@ -55,7 +60,7 @@ jobs: working-directory: . run: | rm -rf docs/py - cp -r pkg-py/docs/_site docs/py + cp -r pkg-py/great-docs/_site docs/py # `clean: false` so this and the pkgdown deploy can each own a # subdirectory of the same branch without erasing the other. diff --git a/.github/workflows/scripts-check.yaml b/.github/workflows/scripts-check.yaml index 5364d8d2..d3a0f61b 100644 --- a/.github/workflows/scripts-check.yaml +++ b/.github/workflows/scripts-check.yaml @@ -20,3 +20,6 @@ jobs: - name: Test noindex-preview.py run: python3 .github/scripts/test_noindex_preview.py + + - name: Test docs-postprocess.py + run: python3 .github/scripts/test_docs_postprocess.py diff --git a/AGENTS.md b/AGENTS.md index 33d84003..5f9bf6b1 100644 --- a/AGENTS.md +++ b/AGENTS.md @@ -2,7 +2,7 @@ This repository is a monorepo holding two implementations of commons: the R pack Work from the relevant package's directory, not the repository root: `pkg-r/` for R (`devtools::load_all()`, `R CMD check`) and `pkg-py/` for Python (`uv run ruff check`, `uv run pyrefly check src tests`, `uv run pytest`). CI is scoped the same way. Run all of a package's checks before pushing; the pyrefly invocation needs its explicit `src tests` paths, because with none it consults the repo's git ignore files and a worktree checked out under an ignored directory silently type-checks nothing. -The documentation sites are the exception, because they are published as one tree: the landing page at the root, the R site under `r/`, and the Python site under `py/`. `scripts/preview-docs.sh` builds both into that tree and serves it, so a change can be read in place. It skips a site whose toolchain is missing rather than failing. Only the Python site gets a pull request preview; the R site follows the usual R package arrangement, where `r/dev/` tracks the development version and `r/` is redeployed by hand at release. +The documentation sites are the exception, because they are published as one tree: the landing page at the root, the R site under `r/`, and the Python site under `py/`. `scripts/preview-docs.sh` builds both into that tree and serves it, so a change can be read in place. It skips a site whose toolchain is missing rather than failing. Only the Python site gets a pull request preview; the R site follows the usual R package arrangement, where `r/dev/` tracks the development version and `r/` is redeployed by hand at release. The Python site is assembled by [great-docs](https://posit-dev.github.io/great-docs/) from `pkg-py/great-docs.yml`, which wraps Quarto rather than replacing it, and publishes a copy per release: the current one at `py/` and the others under `py/v/`. Adding a release to that list is a step in cutting one, not something the build infers. Neither package has been widely adopted or publicly released; changes can be made without a deprecation cycle (or even reference to the way that it used to work). diff --git a/favicon/README.md b/favicon/README.md index 4ced947f..859e1497 100644 --- a/favicon/README.md +++ b/favicon/README.md @@ -11,5 +11,8 @@ Edit the files here, never a copy. The icon paths in `site.webmanifest` are relative, because each site serves its own copy from a different prefix. The `` tags live with each site: the -pkgdown template writes them for the R site, `pkg-py/docs/favicon.html` for the -Python site, and `docs/index.html` for the landing page. +pkgdown template writes them for the R site and `docs/index.html` does it for +the landing page. The Python site's are generated by great-docs, which derives +its own icon set from the `favicon:` source named in `pkg-py/great-docs.yml`; +point that at a PNG rather than the SVG, because great-docs rasterizes an SVG +with cairosvg, which needs a system cairo library. diff --git a/pkg-py/.gitignore b/pkg-py/.gitignore index 21a416cc..38afcb59 100644 --- a/pkg-py/.gitignore +++ b/pkg-py/.gitignore @@ -17,3 +17,8 @@ dist/ /.quarto/ **/*.quarto_ipynb + +# The site great-docs assembles and renders, plus its working directories. +/great-docs/ +/.great-docs/ +/_great_docs_build/ diff --git a/pkg-py/docs/get-started.qmd b/pkg-py/docs/01-get-started.qmd similarity index 100% rename from pkg-py/docs/get-started.qmd rename to pkg-py/docs/01-get-started.qmd diff --git a/pkg-py/docs/governance.qmd b/pkg-py/docs/02-governance.qmd similarity index 95% rename from pkg-py/docs/governance.qmd rename to pkg-py/docs/02-governance.qmd index ff010930..5456c8c0 100644 --- a/pkg-py/docs/governance.qmd +++ b/pkg-py/docs/02-governance.qmd @@ -36,7 +36,7 @@ When viewer credentials are not available, it is recommended to use a service ac ## Python code execution -The Python agent currently has no tool that runs code written by the model, but this feature is expected in the near future. Currently, there is no concern for Python `commons` agents executing arbitrary Python code. When the feature is added, it will generally follow the R package's [R code execution](../r/articles/governance.html#r-code-execution) design. +The Python agent currently has no tool that runs code written by the model, but this feature is expected in the near future. Currently, there is no concern for Python `commons` agents executing arbitrary Python code. When the feature is added, it will generally follow the R package's [R code execution](https://posit-dev.github.io/commons/r/articles/governance.html#r-code-execution) design. ## Permissioning facts @@ -46,4 +46,4 @@ Because of this, you should only include facts that you can share with both the ## Telemetry -The Python implementation of `commons` currently does not support telemetry or conversation logging, though this feature is planned to be added in the near future. When it is added, it will generally follow the R package's [Logging trajectories](../r/articles/governance.html#logging-trajectories) design. +The Python implementation of `commons` currently does not support telemetry or conversation logging, though this feature is planned to be added in the near future. When it is added, it will generally follow the R package's [Logging trajectories](https://posit-dev.github.io/commons/r/articles/governance.html#logging-trajectories) design. diff --git a/pkg-py/docs/feature-parity.qmd b/pkg-py/docs/03-feature-parity.qmd similarity index 100% rename from pkg-py/docs/feature-parity.qmd rename to pkg-py/docs/03-feature-parity.qmd diff --git a/pkg-py/docs/_quarto.yml b/pkg-py/docs/_quarto.yml deleted file mode 100644 index 666cf967..00000000 --- a/pkg-py/docs/_quarto.yml +++ /dev/null @@ -1,102 +0,0 @@ -project: - type: website - # Renders in place, because Quarto warns when its output directory sits - # outside the project. The deploy workflow copies _site into docs/py. - output-dir: _site - # Explicit, so the design notes under notes/ stay out of the site. - render: - - index.qmd - - get-started.qmd - - governance.qmd - - feature-parity.qmd - - reference/*.qmd - # Copied whole: Quarto follows the tags in favicon.html, but not the - # icons site.webmanifest names inside itself. - resources: - - favicon/** - -website: - title: "commons" - site-url: https://posit-dev.github.io/commons/py/ - repo-url: https://github.com/posit-dev/commons - repo-subdir: pkg-py - navbar: - logo: assets/logos/python-logo.svg - left: - - href: get-started.qmd - text: Get started - - href: governance.qmd - text: Security and governance - - href: feature-parity.qmd - text: Feature parity - - href: reference/index.qmd - text: API Reference - right: - - text: '' - # Absolute, so it works from a pull request preview too, which builds - # this site but not the R one. - href: https://posit-dev.github.io/commons/r/ - - icon: box-seam - href: https://pypi.org/project/commons/ - aria-label: commons on PyPI - - icon: github - href: https://github.com/posit-dev/commons - sidebar: - - id: reference - contents: reference/_sidebar.yml - page-footer: - left: "Developed by Josh Taillon, Posit Software, PBC." - right: "Site built with [Quarto](https://quarto.org/)." - -format: - html: - theme: cosmo - toc: true - css: assets/styles.css - include-in-header: favicon.html - -metadata-files: - - reference/_sidebar.yml - -quartodoc: - package: commons - title: Reference - style: pkgdown - dir: reference - sidebar: reference/_sidebar.yml - render_interlinks: false - renderer: - style: markdown - table_style: description-list - sections: - - title: Main functions - desc: | - The main agent constructor, plus the building blocks for a commons agent. - contents: - - Commons - - data_source - - semantic_layer - - measure - - context_layer - - title: Supporting types - desc: | - The objects the constructors return, and the values they carry. - contents: - - DataSource - - SemanticLayer - - ContextLayer - - Measure - - Injected - - Tag - - list_tables - - title: Shiny UI and server - desc: | - Put a commons agent inside of an interactive chat app. Needs the - `shiny` extra. - package: commons.ui - contents: - - app - - server - - theme - - commons_chat_dependency - - asset_base_url diff --git a/pkg-py/docs/assets/styles.css b/pkg-py/docs/assets/styles.css index 723b7e20..47585642 100644 --- a/pkg-py/docs/assets/styles.css +++ b/pkg-py/docs/assets/styles.css @@ -44,50 +44,126 @@ h3 { overflow-wrap: anywhere; } -/* Show the R logo in place of the "R" navbar link text. The url() resolves - relative to this stylesheet, so it works from any page depth (unlike an - img src written into the navbar HTML). Both files live under assets/ - because quarto preview (1.10) fails to copy a CSS url() resource located - at the project root: "Cannot copy ... to a subdirectory of itself". */ -.navbar a[href$="/r/"] { - display: flex; - align-items: center; - /* Fill the stretched nav item, so the centered logo matches the line-box - center of the neighboring icon links. */ - height: 100%; -} - -/* The span carrying the hover title is sized to the logo, so the tooltip - appears anywhere over the image. */ -.navbar a[href$="/r/"] .menu-text { - display: flex; -} - -.navbar a[href$="/r/"] .r-logo { - font-size: 0; - background: url("logos/r-logo.svg") no-repeat center / contain; +/* The R cross-link is injected into great-docs' navbar widget container and + carries its gd-navbar-icon class, so the 34px box, the centring and the + spacing all come from there. Only the logo itself is described here. The + url() resolves relative to this stylesheet, so it works from any page depth + and from any versioned copy of the site, unlike an img src written into the + navbar HTML. great-docs copies this stylesheet to the site root and the + assets directory under user-guide/, which is what the path reflects. */ +.commons-r-link .r-logo { + display: block; width: 1.29rem; height: 1rem; - /* Optical alignment: the logo's visual weight sits low (the gray oval is - lighter than the blue R), so nudge it up from the geometric center. */ + background: url("user-guide/assets/logos/r-logo.svg") no-repeat center / contain; + /* Optical alignment: the logo's visual weight sits low, because the gray + oval is lighter than the blue R, so nudge it up from the geometric + centre. */ margin-top: -2px; } -/* The hex sticker on the home page, floated beside the opening prose the way - pkgdown places it on the R site. It drops to full width on a narrow screen, - where a float would leave the text in a column too thin to read. */ -.commons-hex { - float: right; - width: 180px; - max-width: 40%; - margin: 0 0 1rem 1.5rem; +/* Overrides for great-docs' own stylesheet, which this file loads after. + None of the below has a configuration key. */ + +/* Symbol names stay monospace, but drop the bold: the reference is mostly a + list of them, and weight on top of an underline shouts. */ +.doc-reference dt a, +.doc-reference section.doc-group > dl a, +.table a, +#navbarCollapse > ul.navbar-nav.navbar-nav-scroll.me-auto > li > a:not(.active) { + font-weight: normal; +} + +/* The banner sets a mid-blue background but no text colour, and a code span + keeps its own pale pill, which vanishes into it. */ +.gd-announcement-banner { + color: #fff; } -@media (max-width: 575.98px) { - .commons-hex { - float: none; - display: block; - max-width: 60%; - margin: 0 auto 1.5rem; - } +.gd-announcement-banner code { + background: rgb(255 255 255 / 18%); + color: inherit; + padding: 0.1em 0.3em; + border-radius: 3px; +} + +:root { + /* The brightest text in either theme, so the current item reads as more + prominent than its siblings rather than less. --gd-text-primary is itself + theme-scoped, so one value serves both. */ + --commons-active-link-color: var(--gd-text-primary); + --commons-active-link-weight: bold; + --commons-navbar-hover-bg: rgb(0 0 0 / 14%); + --gd-active-link: var(--gd-text-primary); +} + +/* Repeated because great-docs defines both of these under this same selector, + which outranks :root. */ +body.quarto-dark { + --commons-navbar-hover-bg: rgb(255 255 255 / 14%); + --gd-active-link: var(--gd-text-primary); +} + +/* Current page: weight, not a coloured rule. The sidebar colour is a literal + upstream, so --gd-active-link above does not reach it. */ +#navbarCollapse > ul.navbar-nav.navbar-nav-scroll.me-auto > li > a.active { + font-weight: bold; + /* Two underlines: a bottom border from .nav-underline, a text decoration + from .nav-link.active. */ + border-bottom-color: transparent; + text-decoration: none; +} + +#quarto-sidebar a.sidebar-item-text.sidebar-link.active { + color: var(--commons-active-link-color); + font-weight: var(--commons-active-link-weight); + text-decoration: none; +} + +/* Hover filled the link with an orange pill. Both themes are spelled out + because great-docs sets the dark one at a higher specificity. */ +#navbarCollapse > ul.navbar-nav.navbar-nav-scroll.me-auto > li > a:hover, +body.quarto-dark + #navbarCollapse + > ul.navbar-nav.navbar-nav-scroll.me-auto + > li + > a:hover { + background-color: var(--commons-navbar-hover-bg); + /* Not `inherit`: that takes the list item's colour, not the link's. */ + color: var(--gd-navbar-text); +} + +/* Tables were sized to their widest unwrapped line and scrolled. Suits a data + table; the feature-parity table is prose. */ +.gd-table-scroll > table { + width: 100%; +} + +/* The previous/next page links were drawn as outlined buttons. */ +.nav-page.nav-page-previous a, +.nav-page.nav-page-next a { + border-style: none; + border-width: 0; + border-radius: 0; + padding-left: 0; + padding-right: 0; + margin-left: 0; + margin-right: 0; + text-decoration: underline; +} + +/* The hover pill carries 8px of padding each side but a -8px left margin, so + it sat flush against the sidebar's left edge while inset on the right. */ +#quarto-sidebar.gd-sidebar-float .sidebar-link[href] { + margin-left: 0; +} + +/* The package name is drawn as a bordered pill. The name alone is enough, and + the version beside it duplicates the version selector, so the badge is + stripped from the markup by .github/scripts/docs-postprocess.py. */ +.navbar-title { + border-style: none; + border-width: 0; + border-radius: 0; + padding: 0; } diff --git a/pkg-py/docs/favicon.html b/pkg-py/docs/favicon.html deleted file mode 100644 index c3072b26..00000000 --- a/pkg-py/docs/favicon.html +++ /dev/null @@ -1,7 +0,0 @@ - - - - - - diff --git a/pkg-py/great-docs.yml b/pkg-py/great-docs.yml new file mode 100644 index 00000000..88ce61f1 --- /dev/null +++ b/pkg-py/great-docs.yml @@ -0,0 +1,199 @@ +# The site is assembled by great-docs, which generates a Quarto project into +# great-docs/ and renders it. +display_name: commons +site_url: https://posit-dev.github.io/commons/py/ +repo: https://github.com/posit-dev/commons +pypi: https://pypi.org/project/commons/ + +# The narrative pages. This is a directory, and everything under it is +# rendered, which is why the design notes live in ../notes instead. +user_guide: docs + +# The generated changelog reads GitHub Releases for the whole repository with +# no tag-prefix filter, so it renders the R package's notes on this site. +changelog: + enabled: false + +# Names are relative to the package: `ui.app`, not `commons.ui.app`. A +# section-level `package:` key is accepted and then ignored. `commons.__all__` +# does not export `ui`, so the Shiny entries only appear because they are +# listed here. +reference: + # The dict form, because the navbar label only comes from `title` when + # `reference` is a mapping; as a bare list of sections it is ignored. + title: API Reference + sections: + - title: Main functions + desc: The main agent constructor, plus the building blocks for a commons agent. + contents: [Commons, data_source, semantic_layer, measure, context_layer] + - title: Supporting types + desc: The objects the constructors return, and the values they carry. + contents: [DataSource, SemanticLayer, ContextLayer, Measure, Injected, Tag, list_tables] + - title: Shiny UI and server + desc: "Put a commons agent inside of an interactive chat app. Needs the `shiny` extra." + contents: [ui.app, ui.server, ui.theme, ui.commons_chat_dependency, ui.asset_base_url] + +# Nested under `site:`, which is the key great-docs reads; a top-level +# `css:` is silently ignored. Paths are relative to the project root. +site: + css: + - docs/assets/styles.css + +# The navbar carries the Python mark beside the package name, as the R site +# carries the R mark beside it; show_title is needed because great-docs +# suppresses the text title whenever a logo is set. The hex is the landing +# page's mark, via hero.logo, which otherwise inherits the navbar logo. +logo: + light: docs/assets/logos/python-logo.svg + show_title: true + +# The hero logo path is emitted as the img src verbatim and great-docs does not +# copy the file the way it copies the navbar logo, so this names where the +# asset actually lands in the built site: docs/ is the user_guide directory, +# which is published under user-guide/. The hero is only on the landing page, +# at the site root, so a path relative to the root is right. +hero: + logo: user-guide/assets/hex/commons-hex.png + +# The icon both other sites serve, so all three show the same one in a tab. +# The PNG rather than the SVG source: great-docs rasterizes an SVG with +# cairosvg, which needs a system cairo library, and warns and skips when it +# is missing. Pillow handles the PNG with no extra dependency. +favicon: docs/favicon/favicon-96x96.png + +# Each key renders an icon link beside the name, the way pkgdown does on the R +# site; great-docs does not link the name text itself. +# Each key renders an icon link beside the name, the way pkgdown does on the R +# site; great-docs does not link the name text itself. +authors: + - name: Josh Taillon + role: Maintainer + affiliation: Posit, PBC + github: jat255 + homepage: https://opensource.posit.co/people/josh-taillon/ + orcid: 0000-0002-5185-4503 + +funding: + name: Posit Software, PBC + roles: + - Copyright holder + - funder + homepage: https://posit.co + +include_in_header: + # No config key adds a navbar link, and the generated _quarto.yml is + # rewritten on every build, so the R cross-link is injected instead. + # great-docs collects its own widgets into #gd-navbar-widgets, which is + # built by a script that runs after this one, so the container is polled for + # rather than assumed. Joining that container is what gets the shared flex + # alignment and gap; the gd-navbar-icon class is what makes the link look + # like the neighbouring buttons. The href is absolute so it works from a + # pull request preview and from every /v/ copy, matching the mirror-image + # link in pkg-r/_pkgdown.yml. + - text: | + + + # Selected by class and meta-name substrings on purpose: great-docs drops + # every include_in_header entry whose text contains its own "gd-announcement" + # marker, so naming either in full removes this script silently. + # + # The banner is built client-side and its url is used verbatim, so Quarto + # never rewrites it per page depth and a relative link resolved against the + # current page's directory: from user-guide/ the banner asked for + # user-guide/user-guide/. The prefix comes from Quarto's offset meta, which is + # how great-docs' own version selector and sidebar scripts find the site root, + # and it stays correct in a pull request preview and inside a /v/ copy. + # + # The raw path is read back from the meta, not from the link: assigning to + # a.href reflects the *resolved* absolute URL into the attribute, so reading + # the link would only ever see the already-wrong absolute path. + - text: | + + +versions: + - label: "0.2.0 (dev)" + tag: dev + version: "0.2.0" + prerelease: true + # A beta, but the only published release, so it holds the latest slot and is + # what /py/ serves: that matches what `pip install commons` resolves to. + # `latest` has to be set explicitly, because a prerelease is excluded from + # latest auto-detection and every entry here is one. The beta warning is + # carried by the announcement banner rather than by a selector badge. + - label: "0.1.0b1" + tag: "0.1.0b1" + version: "0.1.0b1" + prerelease: true + latest: true + +version_selector: + enabled: true + placement: navbar-right + warning_banner: true + +version_aliases: + latest: true + stable: true + dev: true + +announcement: + content: "Heads up! `commons` for Python is *still in beta* and is not yet equal to the R package in functionality. Click here to see specific feature parity." + type: info + url: user-guide/feature-parity.html + dismissable: true diff --git a/pkg-py/docs/index.qmd b/pkg-py/index.qmd similarity index 76% rename from pkg-py/docs/index.qmd rename to pkg-py/index.qmd index 671b16dd..489fa3c3 100644 --- a/pkg-py/docs/index.qmd +++ b/pkg-py/index.qmd @@ -2,10 +2,6 @@ title: "commons" --- -```{=html} -The package's hex sticker; a Common Kingfisher drawn in a cartoonish style, sitting on a park bench with a plaque reading 'commons'. Behind the bird is an open green space. -``` - `commons` helps data scientists build trustworthy data agents. Data teams typically have trusted code that they use to analyze their data and build reports and apps. `commons` leverages that expertise, situating the information in a series of prompts and tools designed to create an accurate, fast, and cost-effective agent. @@ -41,7 +37,7 @@ uv pip install "commons[shiny] @ git+https://github.com/posit-dev/commons#subdir `commons` uses [`chatlas`](https://posit-dev.github.io/chatlas/) to access LLMs, so you will need access to one of chatlas's supported providers. -The [Introduction to commons](get-started.qmd) page explains the structure of a `commons` agent and the creation process. For a complete example application, see [`demo.py`](https://github.com/posit-dev/commons/blob/main/pkg-py/demo.py) in the repository. +The [Introduction to commons](user-guide/get-started.qmd) page explains the structure of a `commons` agent and the creation process. For a complete example application, see [`demo.py`](https://github.com/posit-dev/commons/blob/main/pkg-py/demo.py) in the repository. ## Trusted answers @@ -49,8 +45,8 @@ There are two provenance paths available to a `commons` agent. When a user asks Answers display provenance according to the analysis path followed, so users can determine how much trust to put in a given answer. -For more information, see the [Introduction to `commons`](get-started.qmd) page. +For more information, see the [Introduction to `commons`](user-guide/get-started.qmd) page. ## Evaluation -The [DevRel agent](https://github.com/posit-dev/devrel-agent) is an example `commons` agent (using the R implementation) that answers questions about adoption, engagement, and growth across Posit's open-source projects. Its repository contains an [evaluation](https://github.com/posit-dev/devrel-agent/tree/main/evals) comparing the `commons` agent with Claude Code on the same data; the [R documentation](../r/#evaluation) presents the results. +The [DevRel agent](https://github.com/posit-dev/devrel-agent) is an example `commons` agent (using the R implementation) that answers questions about adoption, engagement, and growth across Posit's open-source projects. Its repository contains an [evaluation](https://github.com/posit-dev/devrel-agent/tree/main/evals) comparing the `commons` agent with Claude Code on the same data; the [R documentation](https://posit-dev.github.io/commons/r/#evaluation) presents the results. diff --git a/pkg-py/docs/notes/2026-08-20-execution-prior-art.md b/pkg-py/notes/2026-08-20-execution-prior-art.md similarity index 100% rename from pkg-py/docs/notes/2026-08-20-execution-prior-art.md rename to pkg-py/notes/2026-08-20-execution-prior-art.md diff --git a/pkg-py/docs/notes/2026-08-31-trace-round-trip.md b/pkg-py/notes/2026-08-31-trace-round-trip.md similarity index 100% rename from pkg-py/docs/notes/2026-08-31-trace-round-trip.md rename to pkg-py/notes/2026-08-31-trace-round-trip.md diff --git a/pkg-py/pyproject.toml b/pkg-py/pyproject.toml index 8e37f953..44113beb 100644 --- a/pkg-py/pyproject.toml +++ b/pkg-py/pyproject.toml @@ -45,8 +45,7 @@ shiny = [ [dependency-groups] dev = ["pytest>=8", "pytest-asyncio", 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clean an output directory outside its project, so - # the site renders in place and is copied into position. + # Matches .github/workflows/py-docs.yaml, including the copy and the + # version correction: great-docs renders in place, because quarto warns and + # refuses to clean an output directory outside its project. (cd "$root/pkg-py" && uv sync --extra shiny --group docs --quiet) - (cd "$root/pkg-py/docs" && uv run quartodoc build && uv run quarto render) + (cd "$root/pkg-py" && uv run great-docs build) + read -r site_url repo_url < <(cd "$root/pkg-py" && uv run python -c 'import yaml; c = yaml.safe_load(open("great-docs.yml")); print(c["site_url"], c["repo"])') + (cd "$root/pkg-py" && uv run python "$root/.github/scripts/docs-postprocess.py" great-docs/_site "$site_url" "$repo_url" pkg-py) rm -rf "$root/docs/py" - cp -r "$root/pkg-py/docs/_site" "$root/docs/py" + cp -r "$root/pkg-py/great-docs/_site" "$root/docs/py" } for site in $sites; do