ETHCDTOF.mgf": "mgf" not found frag_type and analyzer_type "ETHCDTOF

[pl572]

Hello,

I have downloaded pLink and Thermo MSFileReader fine. I am having trouble running my Orbitrap data. Please see below log file. Does anyone know how I can fix this problem?

[pParse2Plus] "C:\Users\pl572\Documents\pLink\pLink_task_2026.01.06.14.31.36\pLink_task_2026.01.06.14.31.36.plink" " -t -0.8 -z 5 -i 1 -C 1 -a 0 -p 1 -S 1" " -path:pParse2 ..\pParse.exe -Plus:pxtract_n_isotope 2"
[pParse2Plus] 0, cfg_plus_args: {'path': {'pParse2': '..\pParse.exe'}, 'Plus': {'pxtract_n_isotope': 2}}
[pParse2Plus] 0, C:\Users\pl572\Desktop\MS_Analysis\RAW_Data\251121_MS_PL46-50\Raw_data\QEX03_MF_251217_PL46_106.raw
[cur] 2026-01-06 14:41:03 Starting...
[pParse2Plus] 0, Extract using pParse
[pParse2Plus] "C:\pFindStudio\pLink\3.0.17\bin\pParse.exe" -D "C:\Users\pl572\Desktop\MS_Analysis\RAW_Data\251121_MS_PL46-50\Raw_data\QEX03_MF_251217_PL46_106.raw" -t -0.8 -z 5 -i 1 -C 1 -a 0 -p 1 -S 1 -O "C:\Users\pl572\Desktop\MS_Analysis\RAW_Data\251121_MS_PL46-50\Raw_data"
[ERROR] Traceback (most recent call last):
File "pParse2Plus.py", line 96, in
File "pParse2Plus.py", line 79, in _main
File "flow.py", line 386, in flow.arg_plink_cfg
File "flow.py", line 339, in flow.flow_pparse2plus_cfg
File "flow.py", line 149, in flow.flow_raw_cfg
File "util.py", line 100, in util.get_path_raw_to_mgf
File "util.py", line 94, in util.get_raw_frag_analyzer_type_str
AssertionError: File "C:\Users\pl572\Desktop\MS_Analysis\RAW_Data\251121_MS_PL46-50\Raw_data\QEX03_MF_251217_PL46_106_ETHCDTOF.mgf": "mgf" not found frag_type and analyzer_type "ETHCDTOF"
[29940] Failed to execute script 'pParse2Plus' due to unhandled exception!

[MultiProcess] "C:\Users\pl572\Documents\pLink\pLink_task_2026.01.06.14.31.36\pLink_task_2026.01.06.14.31.36.plink"
[MultiProcess] Start...
[ERROR] Traceback (most recent call last):
File "MultiProcess.py", line 78, in
File "MultiProcess.py", line 70, in _main
File "mp_flow.py", line 623, in mp_flow.flow_auto
File "mp_flow.py", line 65, in mp_flow.sort_raw
File "mp_flow.py", line 39, in mp_flow.stat_pf2_spec_num
FileNotFoundError: [Errno 2] No such file or directory: 'C:\Users\pl572\Desktop\MS_Analysis\RAW_Data\251121_MS_PL46-50\Raw_data\QEX03_MF_251217_PL46_106_HCDFT.pf2'
[PYI-19936:ERROR] Failed to execute script 'MultiProcess' due to unhandled exception!