+**Tool wall-clock budget vs. permission prompts.** Each tool `run()` is wrapped by an outer execution watchdog (`src/tui/tool-execution-watchdog.ts`). The watchdog arms only when Settings set `tools.timeoutMs` / `tools.maxTimeoutMs`, or when `run_shell` passes a positive timeout (requested plus slack, so this layer cannot beat shell-guard). The `task` tool is always exempt, regardless of Settings — a sub-agent run is bounded by its own limits (maxTurns, no-progress, thrash, opt-in deadlineMs), so the generic per-tool budget never aborts a healthy long-running worker; parent cancel, maxTurns, and eval `--agent-timeout-ms` still bound the run. By default (`tools.waitForApproval`, Settings → Tools, **On**), an armed budget freezes while the operator is deciding on a permission prompt, so a late approve still runs the tool and the agent waits for the decision instead of timing out under the modal. When **Off**, the budget keeps ticking during the prompt; if it expires first the tool is skipped and the permission modal is dismissed via the budget AbortSignal (auto-deny with a timeout message). The TUI permission queue (`src/tui/gate-wire.ts`, backed by `src/permission/queue.ts`) attaches that signal so ghost prompts cannot outlive an already-aborted tool.
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