diff --git a/.github/workflows/tests-main.yml b/.github/workflows/tests-main.yml
index d2b7bdb5fc4..c18ed6118cd 100644
--- a/.github/workflows/tests-main.yml
+++ b/.github/workflows/tests-main.yml
@@ -45,6 +45,9 @@ jobs:
       - name: Build
         run: pnpm nx run-many --all --target=build --output-style=stream
         if: ${{ matrix.os == 'ubuntu-latest' && matrix.node == '26.1.0' }}
+      - name: Check formatting
+        run: pnpm prettier
+        if: ${{ matrix.os == 'ubuntu-latest' && matrix.node == '26.1.0' }}
       - name: Lint
         run: pnpm nx run-many --all --target=lint --output-style=stream
         if: ${{ matrix.os == 'ubuntu-latest' && matrix.node == '26.1.0' }}
diff --git a/.github/workflows/tests-pr.yml b/.github/workflows/tests-pr.yml
index 9a2d043e9c4..9d9316aa108 100644
--- a/.github/workflows/tests-pr.yml
+++ b/.github/workflows/tests-pr.yml
@@ -51,6 +51,8 @@ jobs:
         uses: ./.github/actions/setup-cli-deps
         with:
           node-version: ${{ env.DEFAULT_NODE_VERSION }}
+      - name: Check formatting
+        run: pnpm prettier
       - name: Lint
         run: pnpm nx run-many --all --target=lint --output-style=stream
 
diff --git a/.prettierignore b/.prettierignore
index 5a9d7463312..f367bc49f9a 100644
--- a/.prettierignore
+++ b/.prettierignore
@@ -2,5 +2,6 @@ node_modules
 *.md
 bin
 dist
+**/vendor/**
 *.d.ts
 ./fixtures/
diff --git a/dev.yml b/dev.yml
index 6c6bffb6bfc..5b6179d0113 100644
--- a/dev.yml
+++ b/dev.yml
@@ -69,4 +69,4 @@ commands:
 
 check:
   type-check: pnpm nx affected --target=type-check
-  lint: pnpm nx affected --target=lint
+  lint: pnpm lint:affected
diff --git a/docs/cli/get-started.md b/docs/cli/get-started.md
index 1a44d900c4d..4a26ec37d81 100644
--- a/docs/cli/get-started.md
+++ b/docs/cli/get-started.md
@@ -71,8 +71,10 @@ You can also pass these optional flags:
 Besides the scripts for building and running the CLIs, there are others that might come handy when adding code to the project:
 
 - `pnpm test`: Runs the tests of all the packages.
-- `pnpm lint`: Runs ESLint and Prettier checks for all the packages.
-- `pnpm lint:fix`: Runs ESLint and Prettier checks for all the packages and fixes the fixable issues.
+- `pnpm prettier`: Checks formatting for all linted source files.
+- `pnpm prettier:fix`: Formats all linted source files.
+- `pnpm lint`: Runs Prettier and ESLint checks for all the packages.
+- `pnpm lint:fix`: Runs Prettier and ESLint for all the packages and fixes the fixable issues.
 - `pnpm type-check`: Type-checks all the packagesusing the Typescript `tsc` tool.
 - `pnpm clean`: Removes the `dist` directory from all the packages.
 
diff --git a/package.json b/package.json
index a16442d5847..6b3ccc4b1bc 100644
--- a/package.json
+++ b/package.json
@@ -17,10 +17,12 @@
     "graphql-codegen:get-graphql-schemas": "bin/get-graphql-schemas.js",
     "graphql-codegen": "nx run-many --target=graphql-codegen --all",
     "knip": "knip",
-    "lint:affected": "nx affected --target=lint",
-    "lint:fix:affected": "nx affected --target=lint:fix",
-    "lint:fix": "nx run-many --target=lint:fix --all --skip-nx-cache",
-    "lint": "nx run-many --target=lint --all",
+    "lint:affected": "pnpm prettier && nx affected --target=lint",
+    "lint:fix:affected": "nx affected --target=lint:fix && pnpm prettier:fix",
+    "lint:fix": "nx run-many --target=lint:fix --all --skip-nx-cache && pnpm prettier:fix",
+    "lint": "pnpm prettier && nx run-many --target=lint --all",
+    "prettier": "prettier --check \"packages/{app,cli-kit,cli,create-app,organizations,plugin-cloudflare,plugin-did-you-mean,store,theme,ui-extensions-server-kit,ui-extensions-test-utils}/src/**/*.{js,ts,tsx}\" \"packages/cli/bin/*.js\" \"packages/e2e/{setup,helpers,tests}/**/*.ts\" \"packages/e2e/*.ts\"",
+    "prettier:fix": "prettier --write \"packages/{app,cli-kit,cli,create-app,organizations,plugin-cloudflare,plugin-did-you-mean,store,theme,ui-extensions-server-kit,ui-extensions-test-utils}/src/**/*.{js,ts,tsx}\" \"packages/cli/bin/*.js\" \"packages/e2e/{setup,helpers,tests}/**/*.ts\" \"packages/e2e/*.ts\"",
     "create-homebrew-pr": "bin/create-homebrew-pr.js",
     "refresh-code-documentation": "nx run-many --target=refresh-code-documentation --all --skip-nx-cache",
     "refresh-manifests": "nx run-many --target=refresh-manifests --all --skip-nx-cache && bin/prettify-manifests.js && pnpm refresh-readme",
@@ -77,6 +79,7 @@
     "octokit-plugin-create-pull-request": "^3.12.2",
     "pathe": "1.1.2",
     "pin-github-action": "^3.5.1",
+    "prettier": "3.8.4",
     "rimraf": "^6.1.3",
     "ts-node": "^10.9.1",
     "typescript": "5.9.3",
diff --git a/packages/app/project.json b/packages/app/project.json
index aabcf87980c..357117cda8e 100644
--- a/packages/app/project.json
+++ b/packages/app/project.json
@@ -74,13 +74,13 @@
       ],
       "options": {
         "commands": [
-          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/app-dev/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/app-management/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/webhooks/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/functions/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}' --fix"
+          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/app-dev/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/app-dev/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/app-management/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/app-management/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/webhooks/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/webhooks/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/functions/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/functions/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}'"
         ],
         "cwd": "packages/app"
       }
diff --git a/packages/app/src/cli/api/graphql/app-management/generated/create-asset-url.ts b/packages/app/src/cli/api/graphql/app-management/generated/create-asset-url.ts
index 2623c03f68f..0678884dd2b 100644
--- a/packages/app/src/cli/api/graphql/app-management/generated/create-asset-url.ts
+++ b/packages/app/src/cli/api/graphql/app-management/generated/create-asset-url.ts
@@ -9,10 +9,7 @@ export type CreateAssetUrlMutationVariables = Types.Exact<{
 }>
 
 export type CreateAssetUrlMutation = {
-  appRequestSourceUploadUrl: {
-    sourceUploadUrl?: string | null
-    userErrors: {field?: string[] | null; message: string}[]
-  }
+  appRequestSourceUploadUrl: {sourceUploadUrl?: string | null; userErrors: {field?: string[] | null; message: string}[]}
 }
 
 export const CreateAssetUrl = {
diff --git a/packages/app/src/cli/services/app-security-commands.test.ts b/packages/app/src/cli/services/app-security-commands.test.ts
index 3412894b8a4..bf56733a9b7 100644
--- a/packages/app/src/cli/services/app-security-commands.test.ts
+++ b/packages/app/src/cli/services/app-security-commands.test.ts
@@ -508,6 +508,7 @@ describe('formatAppSecurityCommand', () => {
 
   test.skipIf(process.platform !== 'win32')(
     'the PowerShell record command reads a findings file without a byte order mark as UTF-8 in Windows PowerShell 5.1',
+    {timeout: 30000},
     async () => {
       await inTemporaryDirectory(async (directory) => {
         const findingsPath = joinPath(directory, 'findings.json')
@@ -531,7 +532,7 @@ describe('formatAppSecurityCommand', () => {
         const result = spawnSync(
           'powershell.exe',
           ['-NoProfile', '-NonInteractive', '-EncodedCommand', Buffer.from(script, 'utf16le').toString('base64')],
-          {encoding: 'utf8', windowsHide: true},
+          {encoding: 'utf8', windowsHide: true, timeout: 20000},
         )
 
         expect(result.status, result.stderr).toBe(0)
diff --git a/packages/app/tsconfig.build.json b/packages/app/tsconfig.build.json
index 677bc4b992b..8bfb92c4a9f 100644
--- a/packages/app/tsconfig.build.json
+++ b/packages/app/tsconfig.build.json
@@ -1,8 +1,9 @@
 {
     "extends": "./tsconfig.json",
+    "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
     "exclude": ["**/*.test.ts"],
     "references": [
-      {"path": "../cli-kit"},
-      {"path": "../theme"}
+      {"path": "../cli-kit/tsconfig.build.json"},
+      {"path": "../theme/tsconfig.build.json"}
     ]
 }
diff --git a/packages/cli-kit/project.json b/packages/cli-kit/project.json
index d46d4c22ce2..33381599c2f 100644
--- a/packages/cli-kit/project.json
+++ b/packages/cli-kit/project.json
@@ -109,8 +109,8 @@
       ],
       "options": {
         "commands": [
-          "pnpm eslint 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/bulk-operations/generated/**/*.{ts,tsx}' --fix"
+          "pnpm eslint 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/admin/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/bulk-operations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/bulk-operations/generated/**/*.{ts,tsx}'"
         ],
         "cwd": "packages/cli-kit"
       }
diff --git a/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_delete.ts b/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_delete.ts
index 562f2fea00c..b6118f3c5a9 100644
--- a/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_delete.ts
+++ b/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_delete.ts
@@ -8,10 +8,7 @@ export type ThemeDeleteMutationVariables = Types.Exact<{
 }>
 
 export type ThemeDeleteMutation = {
-  themeDelete?: {
-    deletedThemeId?: string | null
-    userErrors: {field?: string[] | null; message: string}[]
-  } | null
+  themeDelete?: {deletedThemeId?: string | null; userErrors: {field?: string[] | null; message: string}[]} | null
 }
 
 export const ThemeDelete = {
diff --git a/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_files_delete.ts b/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_files_delete.ts
index f451cddab4a..aa130a5d60c 100644
--- a/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_files_delete.ts
+++ b/packages/cli-kit/src/cli/api/graphql/admin/generated/theme_files_delete.ts
@@ -11,11 +11,7 @@ export type ThemeFilesDeleteMutationVariables = Types.Exact<{
 export type ThemeFilesDeleteMutation = {
   themeFilesDelete?: {
     deletedThemeFiles?: {filename: string}[] | null
-    userErrors: {
-      filename?: string | null
-      code?: Types.OnlineStoreThemeFilesUserErrorsCode | null
-      message: string
-    }[]
+    userErrors: {filename?: string | null; code?: Types.OnlineStoreThemeFilesUserErrorsCode | null; message: string}[]
   } | null
 }
 
diff --git a/packages/cli-kit/src/cli/api/graphql/bulk-operations/generated/staged-uploads-create.ts b/packages/cli-kit/src/cli/api/graphql/bulk-operations/generated/staged-uploads-create.ts
index c6d15becc46..86ee3a43563 100644
--- a/packages/cli-kit/src/cli/api/graphql/bulk-operations/generated/staged-uploads-create.ts
+++ b/packages/cli-kit/src/cli/api/graphql/bulk-operations/generated/staged-uploads-create.ts
@@ -10,11 +10,7 @@ export type StagedUploadsCreateMutationVariables = Types.Exact<{
 export type StagedUploadsCreateMutation = {
   stagedUploadsCreate?: {
     stagedTargets?:
-      | {
-          url?: string | null
-          resourceUrl?: string | null
-          parameters: {name: string; value: string}[]
-        }[]
+      | {url?: string | null; resourceUrl?: string | null; parameters: {name: string; value: string}[]}[]
       | null
     userErrors: {field?: string[] | null; message: string}[]
   } | null
diff --git a/packages/cli-kit/tsconfig.build.json b/packages/cli-kit/tsconfig.build.json
index 40252e3e2a9..90c77664969 100644
--- a/packages/cli-kit/tsconfig.build.json
+++ b/packages/cli-kit/tsconfig.build.json
@@ -1,4 +1,5 @@
 {
     "extends": "./tsconfig.json",
+    "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
     "exclude": ["**/*.test.ts"],
   }
diff --git a/packages/cli/tsconfig.build.json b/packages/cli/tsconfig.build.json
index e4ba62bb218..5eb1a471496 100644
--- a/packages/cli/tsconfig.build.json
+++ b/packages/cli/tsconfig.build.json
@@ -1,8 +1,9 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"},
-    {"path": "../plugin-did-you-mean"}
+    {"path": "../cli-kit/tsconfig.build.json"},
+    {"path": "../plugin-did-you-mean/tsconfig.build.json"}
   ]
 }
diff --git a/packages/create-app/tsconfig.build.json b/packages/create-app/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/create-app/tsconfig.build.json
+++ b/packages/create-app/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/packages/eslint-plugin-cli/config.js b/packages/eslint-plugin-cli/config.js
index d164966cf68..989ff1f2899 100644
--- a/packages/eslint-plugin-cli/config.js
+++ b/packages/eslint-plugin-cli/config.js
@@ -6,6 +6,11 @@ const noCatchAllPlugin = require('eslint-plugin-no-catch-all')
 const eslintConfigPrettier = require('eslint-config-prettier')
 const globals = require('globals')
 
+const [shopifyPrettierCompatibilityConfig, shopifyPrettierPluginConfig] = shopifyPlugin.configs.prettier
+const shopifyPrettierCompatibilityRules = Object.fromEntries(
+  Object.entries(shopifyPrettierPluginConfig.rules).filter(([ruleName]) => ruleName !== 'prettier/prettier'),
+)
+
 // Load rules directly to avoid circular dependency
 const rules = {
   'command-flags-with-env': require('./rules/command-flags-with-env'),
@@ -260,7 +265,8 @@ const config = [
   // Spread the Shopify configs (these already include typescript-eslint plugin)
   ...shopifyPlugin.configs.typescript,
   ...shopifyPlugin.configs.node,
-  ...shopifyPlugin.configs.prettier,
+  shopifyPrettierCompatibilityConfig,
+  {rules: shopifyPrettierCompatibilityRules},
 
   // Global ignores
   {
diff --git a/packages/eslint-plugin-cli/package.json b/packages/eslint-plugin-cli/package.json
index ad63a5ed272..de348119013 100644
--- a/packages/eslint-plugin-cli/package.json
+++ b/packages/eslint-plugin-cli/package.json
@@ -26,7 +26,6 @@
     "@typescript-eslint/parser": "8.56.1",
     "eslint-config-prettier": "10.1.8",
     "eslint-plugin-no-catch-all": "1.1.0",
-    "eslint-plugin-prettier": "5.5.6",
     "eslint-plugin-react": "7.37.5",
     "eslint-plugin-react-hooks": "5.2.0",
     "eslint-plugin-tsdoc": "0.5.2",
@@ -35,9 +34,6 @@
     "globals": "16.5.0",
     "execa": "7.2.0"
   },
-  "devDependencies": {
-    "prettier": "3.8.4"
-  },
   "peerDependencies": {
     "eslint": "^9.0.0"
   },
diff --git a/packages/organizations/project.json b/packages/organizations/project.json
index 16429e19606..0fbdd920d71 100644
--- a/packages/organizations/project.json
+++ b/packages/organizations/project.json
@@ -53,8 +53,8 @@
       ],
       "options": {
         "commands": [
-          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix"
+          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}'"
         ],
         "cwd": "packages/organizations"
       }
diff --git a/packages/organizations/tsconfig.build.json b/packages/organizations/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/organizations/tsconfig.build.json
+++ b/packages/organizations/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/packages/plugin-cloudflare/tsconfig.build.json b/packages/plugin-cloudflare/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/plugin-cloudflare/tsconfig.build.json
+++ b/packages/plugin-cloudflare/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/packages/plugin-did-you-mean/tsconfig.build.json b/packages/plugin-did-you-mean/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/plugin-did-you-mean/tsconfig.build.json
+++ b/packages/plugin-did-you-mean/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/packages/store/project.json b/packages/store/project.json
index fec892ca4ae..aa887bdc79c 100644
--- a/packages/store/project.json
+++ b/packages/store/project.json
@@ -54,8 +54,8 @@
       ],
       "options": {
         "commands": [
-          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix",
-          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix"
+          "pnpm eslint 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-destinations/generated/**/*.{ts,tsx}'",
+          "pnpm eslint 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}' --fix && pnpm exec prettier --write --ignore-path ../../.prettierignore 'src/cli/api/graphql/business-platform-organizations/generated/**/*.{ts,tsx}'"
         ],
         "cwd": "packages/store"
       }
diff --git a/packages/store/src/cli/api/graphql/business-platform-organizations/generated/delete_app_development_store.ts b/packages/store/src/cli/api/graphql/business-platform-organizations/generated/delete_app_development_store.ts
index f1d0c553aa1..632c004758f 100644
--- a/packages/store/src/cli/api/graphql/business-platform-organizations/generated/delete_app_development_store.ts
+++ b/packages/store/src/cli/api/graphql/business-platform-organizations/generated/delete_app_development_store.ts
@@ -8,10 +8,7 @@ export type DeleteAppDevelopmentStoreMutationVariables = Types.Exact<{
 }>
 
 export type DeleteAppDevelopmentStoreMutation = {
-  deleteAppDevelopmentStore: {
-    success: boolean
-    userErrors: {code?: string | null; field: string[]; message: string}[]
-  }
+  deleteAppDevelopmentStore: {success: boolean; userErrors: {code?: string | null; field: string[]; message: string}[]}
 }
 
 export const DeleteAppDevelopmentStore = {
diff --git a/packages/store/tsconfig.build.json b/packages/store/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/store/tsconfig.build.json
+++ b/packages/store/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/packages/theme/tsconfig.build.json b/packages/theme/tsconfig.build.json
index 16506ad61a2..44c752d5d6d 100644
--- a/packages/theme/tsconfig.build.json
+++ b/packages/theme/tsconfig.build.json
@@ -1,7 +1,8 @@
 {
   "extends": "./tsconfig.json",
+  "compilerOptions": {"tsBuildInfoFile": "dist/tsconfig.build.tsbuildinfo"},
   "exclude": ["**/*.test.ts"],
   "references": [
-    {"path": "../cli-kit"}
+    {"path": "../cli-kit/tsconfig.build.json"}
   ]
 }
diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml
index 7a1f983b4f9..72315573b41 100644
--- a/pnpm-lock.yaml
+++ b/pnpm-lock.yaml
@@ -146,6 +146,9 @@ importers:
       pin-github-action:
         specifier: ^3.5.1
         version: 3.5.1
+      prettier:
+        specifier: 3.8.4
+        version: 3.8.4
       rimraf:
         specifier: ^6.1.3
         version: 6.1.3
@@ -594,9 +597,6 @@ importers:
       eslint-plugin-no-catch-all:
         specifier: 1.1.0
         version: 1.1.0(eslint@9.39.5(jiti@2.6.1))
-      eslint-plugin-prettier:
-        specifier: 5.5.6
-        version: 5.5.6(eslint-config-prettier@10.1.8(eslint@9.39.5(jiti@2.6.1)))(eslint@9.39.5(jiti@2.6.1))(prettier@3.8.4)
       eslint-plugin-react:
         specifier: 7.37.5
         version: 7.37.5(eslint@9.39.5(jiti@2.6.1))
@@ -615,10 +615,6 @@ importers:
       globals:
         specifier: 16.5.0
         version: 16.5.0
-    devDependencies:
-      prettier:
-        specifier: 3.8.4
-        version: 3.8.4
 
   packages/organizations:
     dependencies: