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same **Property name** to columns that represent replicates of the same measurement. - For example, to group ``Luminosity (Rep 1)`` and ``Luminosity (Rep 2)``, assign both the property name ``Replicate Luminosity``. + For example, to group ``mutation_effect_prediction_vae_1`` and ``mutation_effect_prediction_vae_2``, assign both the property name ``mutation_effect_prediction_vae``. .. image:: /_static/opmodels/uploading-your-data/replicate-mapping.png diff --git a/source/web-app/poet/prompts.rst b/source/web-app/poet/prompts.rst index d44d667a..56472862 100644 --- a/source/web-app/poet/prompts.rst +++ b/source/web-app/poet/prompts.rst @@ -82,10 +82,10 @@ You can create a prompt context in three ways: If you've previously uploaded prompts, you can reuse them. In the **Choose from project**, select an existing prompt. The sequences from that prompt will automatically load. -.. image:: /_static/tools/poet/prompt-contenxt-use-existing-1.png +.. image:: /_static/tools/poet/prompt-context-use-existing-1.png :alt: Use existing prompt -.. image:: /_static/tools/poet/prompt-contenxt-use-existing-2.png +.. image:: /_static/tools/poet/prompt-context-use-existing-2.png :alt: Use existing prompt 2. Create Custom Context @@ -182,7 +182,10 @@ Without a Project ^^^^^^^^^^^^^^^^^^^ Navigate to any PoET tool under **Prompt Definition**. You can either input the MSA directly or upload an existing `.fa`, `.fasta`, or `.csv` file. -.. image:: /_static/tools/poet/prompt-6.png +.. image:: /_static/tools/poet/prompt-6-1.png + :alt: Uploading MSA without a project + +.. image:: /_static/tools/poet/prompt-6-2.png :alt: Uploading MSA without a project Within a Project diff --git a/source/web-app/poet/substitution-analysis.rst b/source/web-app/poet/substitution-analysis.rst index 0c87d0c3..eb06e285 100644 --- a/source/web-app/poet/substitution-analysis.rst +++ b/source/web-app/poet/substitution-analysis.rst @@ -93,7 +93,7 @@ Your highest scoring variants and sites are also displayed in tables below the h .. image:: /_static/tools/poet/sub-analysis-1.png :alt: Substitution Analysis Heatmap -Refer to the **Details** tab to see the parameters you used to run the Substitution Analysis. +Refer to the **Input** tab to see the parameters you used to run the Substitution Analysis. Fine-tuning your results ------------------------