Issues

• Refactor to build graphs in GH Actions and provide in repo

  enhancement
  Knowledge-Graph-Hub/kg-obo#215 · Filter by author caufieldjh opened on Mar 15, 2026

• FOODON transform fails

  bug
  Knowledge-Graph-Hub/kg-obo#214 · Filter by author caufieldjh opened on Oct 3, 2024

• Duplicates in node list of PCO , version 2021-05-03,

  bug
  Knowledge-Graph-Hub/kg-obo#209 · Filter by author LucaCappelletti94 opened on Jul 20, 2023
  1

• Duplicates in node list of CHIRO, version 2015-11-23

  bug
  Knowledge-Graph-Hub/kg-obo#208 · Filter by author LucaCappelletti94 opened on Jul 20, 2023
  1

• Update robot to newer version

  bug
  Knowledge-Graph-Hub/kg-obo#207 · Filter by author caufieldjh opened on Jun 16, 2023
  1

• Transform obo-db-ingest

  Knowledge-Graph-Hub/kg-obo#204 · Filter by author caufieldjh opened on Apr 29, 2023

• Verify that kgx validate output gets saved

  bug
  Knowledge-Graph-Hub/kg-obo#203 · Filter by author caufieldjh opened on Mar 10, 2023

• Error in stats generation: duplicate node IDs in bco

  bug
  Knowledge-Graph-Hub/kg-obo#202 · Filter by author caufieldjh opened on Jan 30, 2023

• Include transform of Biolink

  enhancement
  Knowledge-Graph-Hub/kg-obo#197 · Filter by author caufieldjh opened on Dec 12, 2022
  3

• Some compressed graphs include directories, and some are missing

  bug
  Knowledge-Graph-Hub/kg-obo#196 · Filter by author caufieldjh opened on Nov 4, 2022

• Transform CHEBI slim

  Knowledge-Graph-Hub/kg-obo#195 · Filter by author caufieldjh opened on Oct 3, 2022

• Transform of swo does not normalize prefixes

  bug
  Knowledge-Graph-Hub/kg-obo#194 · Filter by author caufieldjh opened on Sep 26, 2022

• Some transforms still have OBO: prefixes for native nodes

  bug
  Knowledge-Graph-Hub/kg-obo#193 · Filter by author caufieldjh opened on Sep 26, 2022

• Transform of vo does not get started due to non-unique VersionIRI

  bug
  Knowledge-Graph-Hub/kg-obo#191 · Filter by author caufieldjh opened on Sep 20, 2022

• Transforms of agro, envo, and gaz fail during post-processing

  bug
  Knowledge-Graph-Hub/kg-obo#186 · Filter by author caufieldjh opened on Sep 19, 2022
  9

• Error building stats for bco

  bug
  Knowledge-Graph-Hub/kg-obo#184 · Filter by author caufieldjh opened on Sep 16, 2022

• Illegal instruction (core dumped) during build

  bug
  Knowledge-Graph-Hub/kg-obo#179 · Filter by author caufieldjh opened on Sep 14, 2022
  4

• Transform NCBI Taxon Slim

  Knowledge-Graph-Hub/kg-obo#170 · Filter by author caufieldjh opened on Aug 14, 2022

• Retrieve transform stats with NEAT

  enhancement
  Knowledge-Graph-Hub/kg-obo#147 · Filter by author caufieldjh opened on Dec 13, 2021
  1

• KG-OBO Dashboard

  enhancement
  Knowledge-Graph-Hub/kg-obo#126 · Filter by author caufieldjh opened on Nov 4, 2021
  1

• All graphs have only a node type

  bug
  Knowledge-Graph-Hub/kg-obo#111 · Filter by author LucaCappelletti94 opened on Oct 20, 2021
  3

• Validate links during Jenkins build

  enhancement
  Knowledge-Graph-Hub/kg-obo#105 · Filter by author caufieldjh opened on Oct 19, 2021
  1

• Provide a jupyter cell that loads a kgx tar ball into KGX

  Knowledge-Graph-Hub/kg-obo#55 · Filter by author matentzn opened on Sep 17, 2021
  1

• Deploy KG OBO as blazegraph instance

  Knowledge-Graph-Hub/kg-obo#54 · Filter by author matentzn opened on Sep 17, 2021
  1

• Apply KGCL for assessing changes between KG releases

  enhancement
  Knowledge-Graph-Hub/kg-obo#30 · Filter by author justaddcoffee opened on Sep 10, 2021
  1